about
A review of metabolic and enzymatic engineering strategies for designing and optimizing performance of microbial cell factoriesThe mechanism of substrate (aglycone) specificity in beta -glucosidases is revealed by crystal structures of mutant maize beta -glucosidase-DIMBOA, -DIMBOAGlc, and -dhurrin complexesCrystal structure of a monocotyledon (maize ZMGlu1) beta-glucosidase and a model of its complex with p-nitrophenyl beta-D-thioglucosideStructural insights into rice BGlu1 beta-glucosidase oligosaccharide hydrolysis and transglycosylationTyrosine aminotransferase: biochemical and structural properties and molecular dynamics simulationsComputational modeling-based discovery of novel classes of anti-inflammatory drugs that target lanthionine synthetase C-like protein 2Transforming Sphingosine Kinase 1 Inhibitors into Dual and Sphingosine Kinase 2 Selective Inhibitors: Design, Synthesis, and in Vivo Activity.Structure-Activity Relationship Studies and Molecular Modeling of Naphthalene-Based Sphingosine Kinase 2 Inhibitors.Fast identification of thermostable beta-glucosidase mutants on cellobiose by a novel combinatorial selection/screening approach.Virtual Screening as a Technique for PPAR Modulator Discovery.Molecular modeling of lanthionine synthetase component C-like protein 2: a potential target for the discovery of novel type 2 diabetes prophylactics and therapeutics.Biophysical and molecular-dynamics studies of phosphatidic acid binding by the Dvl-2 DEP domain.Molecular dynamics simulations of the d(CCAACGTTGG)(2) decamer: influence of the crystal environment.A steroid receptor coactivator acts as the DNA-binding partner of the methoprene-tolerant protein in regulating juvenile hormone response genes.Study and design of stability in GH5 cellulases.Phosphorylation of PPARγ Affects the Collective Motions of the PPARγ-RXRα-DNA Complex.Deletion of the N-terminal dirigent domain in maize beta-glucosidase aggregating factor and its homolog sorghum lectin dramatically alters the sugar-specificities of their lectin domains.Lipid composition influences the release of Alzheimer's amyloid β-peptide from membranes.Natural product-based amyloid inhibitors.Development of a structured undergraduate research experience: Framework and implications.Steered molecular dynamics identifies critical residues of the Nodamura virus B2 suppressor of RNAi.Molecular dynamics of the asymmetric dimers of EGFR: simulations on the active and inactive conformations of the kinase domain.Effects of asbetos, iron oxide, silica, and carbon black on the microsomal availability of benzo[a]pyrene.Molecular Dynamics Simulations of Amyloid β-Peptide (1-42): Tetramer Formation and Membrane InteractionsHomolog of the maize beta-glucosidase aggregating factor from sorghum is a jacalin-related GalNAc-specific lectin but lacks protein aggregating activity.Assessing the stability of Alzheimer's amyloid protofibrils using molecular dynamics.Scopolin-hydrolyzing beta-glucosidases in roots of Arabidopsis.Steered molecular dynamics simulations reveal important mechanisms in reversible monoamine oxidase B inhibition.Determination of beta-glucosidase aggregating factor (BGAF) binding and polymerization regions on the maize beta-glucosidase isozyme Glu1.Functional genomic analysis of Arabidopsis thaliana glycoside hydrolase family 35.The aglycone specificity-determining sites are different in 2, 4-dihydroxy-7-methoxy-1,4-benzoxazin-3-one (DIMBOA)-glucosidase (Maize beta -glucosidase) and dhurrinase (Sorghum beta -glucosidase).Structural determinants of substrate specificity in family 1 beta-glucosidases: novel insights from the crystal structure of sorghum dhurrinase-1, a plant beta-glucosidase with strict specificity, in complex with its natural substrate.Quinol diglucuronides are predominant conjugated metabolites found in bile of rats following intratracheal instillation of benzo[a]pyrene.Correlation between protein binding strength on immobilized metal affinity chromatography and the histidine-related protein surface structure.Application of molecular modeling to analysis of inhibition of kinesin motor proteins of the BimC subfamily by monastrol and related compounds.Maize beta-glucosidase-aggregating factor is a polyspecific jacalin-related chimeric lectin, and its lectin domain is responsible for beta-glucosidase aggregation.Application of alkaline unwinding to analysis of strand breaks induced by bleomycin in hamster lung DNA in vivo.Molecular docking of inhibitors into monoamine oxidase B.A comparative molecular dynamics analysis of the amyloid beta-peptide in a lipid bilayer.Quantifying protein microstructure and electrostatic effects on the change in Gibbs free energy of binding in immobilized metal affinity chromatography.
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David R. Bevan
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