InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic. - Wikidata - awgldk - TriplyDB

InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic.

InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic.

http://www.wikidata.org/entity/Q43215045

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SorghumFDB: sorghum functional genomics database with multidimensional network analysis The 2015 Nucleic Acids Research Database Issue and molecular biology database collection HieranoiDB: a database of orthologs inferred by Hieranoid Screening lifespan-extending drugs in Caenorhabditis elegans via label propagation on drug-protein networks WORMHOLE: Novel Least Diverged Ortholog Prediction through Machine Learning An inter-species protein-protein interaction network across vast evolutionary distance eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences Standardized benchmarking in the quest for orthologs Protein Bioinformatics Databases and Resources.Chemosensory adaptations of the mountain fly Drosophila nigrosparsa (Insecta: Diptera) through genomics' and structural biology's lenses.Transcript profiling of a novel plant meristem, the monocot cambium.Using structural knowledge in the protein data bank to inform the search for potential host-microbe protein interactions in sequence space: application to Mycobacterium tuberculosis.Heterogeneous molecular processes among the causes of how sequence similarity scores can fail to recapitulate phylogeny.Co-occurring protein phosphorylation are functionally associated.Identifying pathogenicity of human variants via paralog-based yeast complementation.Systematic characterization and prediction of post-translational modification cross-talk.Predicted protein-protein interactions in the moss Physcomitrella patens: a new bioinformatic resource Leveraging DNA damage response signaling to identify yeast genes controlling genome stability.Suppression of ASKβ (AtSK32), a Clade III Arabidopsis GSK3, Leads to the Pollen Defect during Late Pollen Development.Complex Population Structure and Virulence Differences among Serotype 2 Streptococcus suis Strains Belonging to Sequence Type 28.OrthoVenn: a web server for genome wide comparison and annotation of orthologous clusters across multiple species.Population Structure and Antimicrobial Resistance Profiles of Streptococcus suis Serotype 2 Sequence Type 25 Strains.Independent Evolution of Winner Traits without Whole Genome Duplication in Dekkera Yeasts.A New Orthology Assessment Method for Phylogenomic Data: Unrooted Phylogenetic Orthology.A full-body transcriptome and proteome resource for the European common carp.Genomic and transcriptomic comparison between Staphylococcus aureus strains associated with high and low within herd prevalence of intra-mammary infection.Preferential expression of scores of functionally and evolutionarily diverse DNA and RNA-binding proteins during Oxytricha trifallax macronuclear development.Orthograph: a versatile tool for mapping coding nucleotide sequences to clusters of orthologous genes.Human MFAP1 is a cryptic ortholog of the Saccharomyces cerevisiae Spp381 splicing factor dbPAF: an integrative database of protein phosphorylation in animals and fungi Conserved and Diverged Functions of the Calcineurin-Activated Prz1 Transcription Factor in Fission Yeast.Comparative genome-scale modelling of Staphylococcus aureus strains identifies strain-specific metabolic capabilities linked to pathogenicity PoplarGene: poplar gene network and resource for mining functional information for genes from woody plants.Genome Sequence of a Lactococcus lactis Strain Isolated from Salmonid Intestinal Microbiota CardioTF, a database of deconstructing transcriptional circuits in the heart system.Proteome distribution between nucleoplasm and nucleolus and its relation to ribosome biogenesis in Arabidopsis thaliana Survey of Genes Involved in Biosynthesis, Transport, and Signaling of Phytohormones with Focus on Solanum lycopersicum UV crosslinked mRNA-binding proteins captured from leaf mesophyll protoplasts.A computational interactome and functional annotation for the human proteome.Identification of critical paralog groups with indispensable roles in the regulation of signaling flow.

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P2860

InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic.

http://www.wikidata.org/entity/Q43215045

description

2014 nî lūn-bûn

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2014年の論文

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2014年学术文章

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2014年学术文章

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2014年學術文章

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name

InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic.

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InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic.

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InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic.

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InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic.

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InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic.

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InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic.

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Nucleic Acids Research

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InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic.

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Gabriel Östlund

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InParanoid 7: new algorithms and tools for eukaryotic orthology analysis

Basic local alignment search tool

Big data and other challenges in the quest for orthologs

Pfam: the protein families database

Prediction of gene-phenotype associations in humans, mice, and plants using phenologs

Comparative genomics of eukaryotic small nucleolar RNAs reveals deep evolutionary ancestry amidst ongoing intragenomic mobility

Automatic clustering of orthologs and in-paralogs from pairwise species comparisons

Update on activities at the Universal Protein Resource (UniProt) in 2013

Distinguishing homologous from analogous proteins

Benchmarking ortholog identification methods using functional genomics data.

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10.1093/NAR/GKU1203

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Database issue

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43

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Erik Sonnhammer

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