Characterization of metabolism in the Fe(III)-reducing organism Geobacter sulfurreducens by constraint-based modeling.
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OptForce: an optimization procedure for identifying all genetic manipulations leading to targeted overproductionsComparative genomic analysis of Geobacter sulfurreducens KN400, a strain with enhanced capacity for extracellular electron transfer and electricity productionGenomic determinants of organohalide-respiration in Geobacter lovleyi, an unusual member of the GeobacteraceaeThe genome of Geobacter bemidjiensis, exemplar for the subsurface clade of Geobacter species that predominate in Fe(III)-reducing subsurface environmentsEvolution of electron transfer out of the cell: comparative genomics of six Geobacter genomesGenome-wide analysis of the RpoN regulon in Geobacter sulfurreducensConstraint-based analysis of metabolic capacity of Salmonella typhimurium during host-pathogen interactionMetabolic response of Geobacter sulfurreducens towards electron donor/acceptor variationRevealing the structural origin of the redox-Bohr effect: the first solution structure of a cytochrome from Geobacter sulfurreducensComputational and experimental analysis of redundancy in the central metabolism of Geobacter sulfurreducensConstraint-based model of Shewanella oneidensis MR-1 metabolism: a tool for data analysis and hypothesis generationConstraint-based modeling of carbon fixation and the energetics of electron transfer in Geobacter metallireducensStructure, function, and mechanism of the nickel metalloenzymes, CO dehydrogenase, and acetyl-CoA synthaseComputational identification of obligatorily autocatalytic replicators embedded in metabolic networksApplications of genome-scale metabolic reconstructions.Construction and completion of flux balance models from pathway databasesGenome-wide gene regulation of biosynthesis and energy generation by a novel transcriptional repressor in Geobacter species.Evaluation of a genome-scale in silico metabolic model for Geobacter metallireducens by using proteomic data from a field biostimulation experiment.Subsurface clade of Geobacteraceae that predominates in a diversity of Fe(III)-reducing subsurface environments.Genome-scale models of bacterial metabolism: reconstruction and applications.Genome-scale constraint-based modeling of Geobacter metallireducensEvolution from a respiratory ancestor to fill syntrophic and fermentative niches: comparative fenomics of six Geobacteraceae species.Genome-scale comparison and constraint-based metabolic reconstruction of the facultative anaerobic Fe(III)-reducer Rhodoferax ferrireducens.Characterization of proton production and consumption associated with microbial metabolism.Characterizing the metabolism of Dehalococcoides with a constraint-based model.Influence of external resistance on electrogenesis, methanogenesis, and anode prokaryotic communities in microbial fuel cellsConstraint-based modeling analysis of the metabolism of two Pelobacter species.Thermodynamic characterization of a triheme cytochrome family from Geobacter sulfurreducens reveals mechanistic and functional diversity.Functional metabolic map of Faecalibacterium prausnitzii, a beneficial human gut microbe.OptCom: a multi-level optimization framework for the metabolic modeling and analysis of microbial communitiesAnaerobic oxidation of benzene by the hyperthermophilic archaeon Ferroglobus placidusThe growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli.Analysis of enhanced current-generating mechanism of Geobacter sulfurreducens strain via model-driven metabolism simulation.Accomplishments in genome-scale in silico modeling for industrial and medical biotechnologyUsing the reconstructed genome-scale human metabolic network to study physiology and pathologySurvey of Microbial Diversity in Flood Areas during Thailand 2011 Flood Crisis Using High-Throughput Tagged Amplicon Pyrosequencing.Metabolic modeling of a mutualistic microbial community.Flux analysis of central metabolic pathways in Geobacter metallireducens during reduction of soluble Fe(III)-nitrilotriacetic acidFine Tuning of Redox Networks on Multiheme Cytochromes from Geobacter sulfurreducens Drives Physiological Electron/Proton Energy TransductionElectrochemical techniques reveal that total ammonium stress increases electron flow to anode respiration in mixed-species bacterial anode biofilms.
P2860
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P2860
Characterization of metabolism in the Fe(III)-reducing organism Geobacter sulfurreducens by constraint-based modeling.
description
2006 nî lūn-bûn
@nan
2006年の論文
@ja
2006年学术文章
@wuu
2006年学术文章
@zh
2006年学术文章
@zh-cn
2006年学术文章
@zh-hans
2006年学术文章
@zh-my
2006年学术文章
@zh-sg
2006年學術文章
@yue
2006年學術文章
@zh-hant
name
Characterization of metabolism in the Fe
@nl
Characterization of metabolism ...... by constraint-based modeling.
@en
type
label
Characterization of metabolism in the Fe
@nl
Characterization of metabolism ...... by constraint-based modeling.
@en
prefLabel
Characterization of metabolism in the Fe
@nl
Characterization of metabolism ...... by constraint-based modeling.
@en
P2093
P2860
P1476
Characterization of metabolism ...... by constraint-based modeling.
@en
P2093
Esteve-Nuñez A
Mahadevan R
Palsson BO
Schilling CH
P2860
P304
P356
10.1128/AEM.72.2.1558-1568.2006
P407
P577
2006-02-01T00:00:00Z