Transient transcriptional responses to stress are generated by opposing effects of mRNA production and degradation. - Wikidata - awgldk - TriplyDB

Transient transcriptional responses to stress are generated by opposing effects of mRNA production and degradation.

Transient transcriptional responses to stress are generated by opposing effects of mRNA production and degradation.

http://www.wikidata.org/entity/Q43243061

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Comparative gene expression between two yeast species Reconsidering plant memory: Intersections between stress recovery, RNA turnover, and epigenetics Ccr4-Not complex: the control freak of eukaryotic cells Pat1 contributes to the RNA binding activity of the Lsm1-7-Pat1 complex.Systematic analysis of cis-elements in unstable mRNAs demonstrates that CUGBP1 is a key regulator of mRNA decay in muscle cells Complex degradation processes lead to non-exponential decay patterns and age-dependent decay rates of messenger RNA Multiple Transcript Properties Related to Translation Affect mRNA Degradation Rates in Saccharomyces cerevisiae Unstable transcripts in Arabidopsis allotetraploids are associated with nonadditive gene expression in response to abiotic and biotic stresses hCAF1/CNOT7 regulates interferon signalling by targeting STAT1.Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast Properties of untranslated regions of the S. cerevisiae genome.Reconstructing transcriptional regulatory networks through genomics data.Major role for mRNA stability in shaping the kinetics of gene induction.Entrainment to periodic initiation and transition rates in a computational model for gene translation Predicting the dynamics of protein abundance.The global dynamics of RNA stability orchestrates responses to cellular activation.Analysis and prediction of translation rate based on sequence and functional features of the mRNA.Heat shock response in yeast involves changes in both transcription rates and mRNA stabilities Metabolic cycling in single yeast cells from unsynchronized steady-state populations limited on glucose or phosphate.Poly(A)-tail profiling reveals an embryonic switch in translational control.Coupled evolution of transcription and mRNA degradation.Genome-scale analysis of translation elongation with a ribosome flow model.Transcriptome kinetics is governed by a genome-wide coupling of mRNA production and degradation: a role for RNA Pol II Global coordination of transcriptional control and mRNA decay during cellular differentiation.Contributions of transcription and mRNA decay to gene expression dynamics of fission yeast in response to oxidative stress.Sequestration of highly expressed mRNAs in cytoplasmic granules, P-bodies, and stress granules enhances cell viability.Determination of in vivo RNA kinetics using RATE-seq.The adjacent positioning of co-regulated gene pairs is widely conserved across eukaryotes The contribution of RNA decay quantitative trait loci to inter-individual variation in steady-state gene expression levels.The molecular basis of invasiveness: differences in gene expression of native and introduced common ragweed (Ambrosia artemisiifolia) in stressful and benign environments.The Rpb4/7 module of RNA polymerase II is required for carbon catabolite repressor protein 4-negative on TATA (Ccr4-not) complex to promote elongation.Measurements of the impact of 3' end sequences on gene expression reveal wide range and sequence dependent effects.Role of mRNA stability during bacterial adaptation High-resolution sequencing and modeling identifies distinct dynamic RNA regulatory strategies Transcriptome-wide analysis of trypanosome mRNA decay reveals complex degradation kinetics and suggests a role for co-transcriptional degradation in determining mRNA levels.Metabolic labeling of RNA uncovers principles of RNA production and degradation dynamics in mammalian cells Transcript features alone enable accurate prediction and understanding of gene expression in S. cerevisiae.Quantifying the effect of ribosomal density on mRNA stability Systematic analysis of the role of RNA-binding proteins in the regulation of RNA stability.Inferring regulatory mechanisms from patterns of evolutionary divergence

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P2860

Transient transcriptional responses to stress are generated by opposing effects of mRNA production and degradation.

http://www.wikidata.org/entity/Q43243061

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2008 nî lūn-bûn

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2008年の論文

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2008年学术文章

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2008年学术文章

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2008年學術文章

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Transient transcriptional resp ...... NA production and degradation.

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Transient transcriptional resp ...... NA production and degradation.

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Transient transcriptional resp ...... NA production and degradation.

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Transient transcriptional resp ...... NA production and degradation.

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Transient transcriptional resp ...... NA production and degradation.

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Transient transcriptional resp ...... NA production and degradation.

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Molecular Systems Biology

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Transient transcriptional resp ...... NA production and degradation.

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Itay Furman

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Maria Rodriguez Martinez

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Michal Levo

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Ophir Shalem

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Orna Dahan

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Yitzhak Pilpel

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P2860

A catalog of stability-associated sequence elements in 3' UTRs of yeast mRNAs

Genomic expression programs in the response of yeast cells to environmental changes

The RNA polymerase II subunit Rpb4p mediates decay of a specific class of mRNAs.

Eucaryotic RNA polymerase conditional mutant that rapidly ceases mRNA synthesis.

The Rpb7p subunit of yeast RNA polymerase II plays roles in the two major cytoplasmic mRNA decay mechanisms.

Profiling condition-specific, genome-wide regulation of mRNA stability in yeast.

Regulatory networks revealed by transcriptional profiling of damaged Saccharomyces cerevisiae cells: Rpn4 links base excision repair with proteasomes.

Genomic run-on evaluates transcription rates for all yeast genes and identifies gene regulatory mechanisms

The highways and byways of mRNA decay

Network motifs: simple building blocks of complex networks

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10.1038/MSB.2008.59

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