about
CoryneRegNet: an ontology-based data warehouse of corynebacterial transcription factors and regulatory networks.Graph-based analysis and visualization of experimental results with ONDEXComprehensive analysis of high-throughput screens with HiTSeekRLarge scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editingReliable transfer of transcriptional gene regulatory networks between taxonomically related organisms.BiCluE - Exact and heuristic algorithms for weighted bi-cluster editing of biomedical data.Bi-Force: large-scale bicluster editing and its application to gene expression data biclustering.Current breathomics--a review on data pre-processing techniques and machine learning in metabolomics breath analysis.Classification of breast cancer subtypes by combining gene expression and DNA methylation data.Computational methods for metabolomic data analysis of ion mobility spectrometry data-reviewing the state of the art.Jllumina - A comprehensive Java-based API for statistical Illumina Infinium HumanMethylation450 and MethylationEPIC data processing.Linking Cytoscape and the corynebacterial reference database CoryneRegNetOn the trail of EHEC/EAEC--unraveling the gene regulatory networks of human pathogenic Escherichia coli bacteria.From Corynebacterium glutamicum to Mycobacterium tuberculosis--towards transfers of gene regulatory networks and integrated data analyses with MycoRegNet.On the importance of statistics in breath analysis--hope or curse?AltAnalyze and DomainGraph: analyzing and visualizing exon expression dataValue of a newly sequenced bacterial genomeOn the performance of de novo pathway enrichment.Analysis of quality raw data of second generation sequencers with Quality Assessment Software.Evidence for reductive genome evolution and lateral acquisition of virulence functions in two Corynebacterium pseudotuberculosis strains.clusterMaker: a multi-algorithm clustering plugin for Cytoscape.Efficient key pathway mining: combining networks and OMICS data.PIPS: pathogenicity island prediction software.Integrated simultaneous analysis of different biomedical data types with exact weighted bi-cluster editing.On the power and limits of evolutionary conservation--unraveling bacterial gene regulatory networks.Efficient sample tracking with OpenLabFrameworkKeyPathwayMiner 4.0: condition-specific pathway analysis by combining multiple omics studies and networks with Cytoscape.Massive fungal biodiversity data re-annotation with multi-level clusteringCMRegNet-An interspecies reference database for corynebacterial and mycobacterial regulatory networksEfficient detection of differentially methylated regions using DiMmeR.Towards the integrated analysis, visualization and reconstruction of microbial gene regulatory networks.On the limits of computational functional genomics for bacterial lifestyle prediction.Drug repurposing by integrated literature mining and drug-gene-disease triangulation.Live sequence charts to model medical information.CoryneRegNet 3.0--an interactive systems biology platform for the analysis of gene regulatory networks in corynebacteria and Escherichia coli.On the performance of pre-microRNA detection algorithms.Elucidation of Altered Pathways in Tumor-Initiating Cells of Triple-Negative Breast Cancer: A Useful Cell Model System for Drug Screening.Interactive microbial distribution analysis using BioAtlas.A systematic review of breath analysis and detection of volatile organic compounds in COPD.Comparing the performance of biomedical clustering methods.
P50
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P50
description
hulumtues
@sq
onderzoeker
@nl
researcher
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հետազոտող
@hy
name
Jan Baumbach
@ast
Jan Baumbach
@en
Jan Baumbach
@es
Jan Baumbach
@nl
Jan Baumbach
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type
label
Jan Baumbach
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Jan Baumbach
@en
Jan Baumbach
@es
Jan Baumbach
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Jan Baumbach
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prefLabel
Jan Baumbach
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Jan Baumbach
@en
Jan Baumbach
@es
Jan Baumbach
@nl
Jan Baumbach
@sl
P106
P21
P2456
P31
P496
0000-0002-0282-0462