Validation of two ribosomal RNA removal methods for microbial metatranscriptomics. - Wikidata - awgldk - TriplyDB

Validation of two ribosomal RNA removal methods for microbial metatranscriptomics.

Validation of two ribosomal RNA removal methods for microbial metatranscriptomics.

http://www.wikidata.org/entity/Q44744271

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Valuable lessons-learned in transcriptomics experimentation RNA-Seq methods for transcriptome analysis Next-generation sequencing in clinical virology: Discovery of new viruses High-throughput metagenomic technologies for complex microbial community analysis: open and closed formats RNA-Seq technology and its application in fish transcriptomics Single-cell RNA-seq: advances and future challenges Metatranscriptomics reveals the molecular mechanism of large granule formation in granular anammox reactor.A genome-wide survey of highly expressed non-coding RNAs and biological validation of selected candidates in Agrobacterium tumefaciens Using genome-wide expression profiling to define gene networks relevant to the study of complex traits: from RNA integrity to network topology Comparative transcriptomics of pathogenic and non-pathogenic Listeria species Identification and removal of ribosomal RNA sequences from metatranscriptomes The bovine milk microbiota: insights and perspectives from -omics studies.A next generation sequencing-based method to study the intra-host genetic diversity of norovirus in patients with acute and chronic infection.Microbial diversity and activity in the Nematostella vectensis holobiont: insights from 16S rRNA gene sequencing, isolate genomes, and a pilot-scale survey of gene expression.Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes Comparison of library preparation methods reveals their impact on interpretation of metatranscriptomic data.Duplex-specific nuclease efficiently removes rRNA for prokaryotic RNA-seq.Viral Encephalitis of Unknown Cause: Current Perspective and Recent Advances.Analysis of plant microbe interactions in the era of next generation sequencing technologies.Extraction of bacterial RNA from soil: challenges and solutions.Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries.Unraveling the stratification of an iron-oxidizing microbial mat by metatranscriptomics.Directional RNA deep sequencing sheds new light on the transcriptional response of Anabaena sp. strain PCC 7120 to combined-nitrogen deprivation.Fur is the master regulator of the extraintestinal pathogenic Escherichia coli response to serum.Metatranscriptomics reveals the diversity of genes expressed by eukaryotes in forest soils.Ecology of the microbiome of the infected root canal system: a comparison between apical and coronal root segments.Genome-wide identification of novel small RNAs in Pseudomonas aeruginosa.Metagenomics and metatranscriptomics: windows on CF-associated viral and microbial communities.The single-nucleotide resolution transcriptome of Pseudomonas aeruginosa grown in body temperature.How deep is deep enough for RNA-Seq profiling of bacterial transcriptomes?Saccharopolyspora erythraea's genome is organised in high-order transcriptional regions mediated by targeted degradation at the metabolic switch.Chromatin is an ancient innovation conserved between Archaea and Eukarya.Rapid identification of novel immunodominant proteins and characterization of a specific linear epitope of Campylobacter jejuni.Organism-specific rRNA capture system for application in next-generation sequencing The potential of metatranscriptomics for identifying screening targets for bacterial vaginosis Metatranscriptomic analyses of plankton communities inhabiting surface and subpycnocline waters of the Chesapeake Bay during oxic-anoxic-oxic transitions.Analysis of microbial diversity by pyrosequencing the small-subunit ribosomal RNA without PCR amplification.The functional and taxonomic richness of wastewater treatment plant microbial communities are associated with each other and with ambient nitrogen and carbon availability.Metatranscriptomic analysis of arctic peat soil microbiota.Niche and host-associated functional signatures of the root surface microbiome.

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P2860

Validation of two ribosomal RNA removal methods for microbial metatranscriptomics.

http://www.wikidata.org/entity/Q44744271

description

2010 nî lūn-bûn

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2010年の論文

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2010年学术文章

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2010年学术文章

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2010年学术文章

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2010年学术文章

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2010年学术文章

@zh-my

2010年学术文章

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2010年學術文章

@yue

2010年學術文章

@zh-hant

name

Validation of two ribosomal RNA removal methods for microbial metatranscriptomics.

@en

Validation of two ribosomal RNA removal methods for microbial metatranscriptomics.

@nl

type

label

Validation of two ribosomal RNA removal methods for microbial metatranscriptomics.

@en

Validation of two ribosomal RNA removal methods for microbial metatranscriptomics.

@nl

prefLabel

Validation of two ribosomal RNA removal methods for microbial metatranscriptomics.

@en

Validation of two ribosomal RNA removal methods for microbial metatranscriptomics.

@nl

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Validation of two ribosomal RNA removal methods for microbial metatranscriptomics.

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P2093

Erika A Lindquist

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Feng Chen

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Jeff L Froula

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Kanwar Singh

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Omri Wurtzel

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Rotem Sorek

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Shaomei He

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Suzan Yilmaz

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Zhong Wang

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P2860

The RIN: an RNA integrity number for assigning integrity values to RNA measurements

Microbial community gene expression in ocean surface waters

A large genome center's improvements to the Illumina sequencing system.

Detection of large numbers of novel sequences in the metatranscriptomes of complex marine microbial communities.

RNA:protein ratio of the unicellular organism as a characteristic of phosphorous and nitrogen stoichiometry and of the cellular requirement of ribosomes for protein synthesis.

Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptome

Isolation and analysis of mRNA from environmental microbial communities.

Potential for phosphonoacetate utilization by marine bacteria in temperate coastal waters.

Transcriptional activity of paddy soil bacterial communities.

Comparative day/night metatranscriptomic analysis of microbial communities in the North Pacific subtropical gyre.

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807-812

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10.1038/NMETH.1507

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10

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7

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Philip Hugenholtz

Susannah G Tringe

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2010-09-19T00:00:00Z

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46306871

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