DiMoVo: a Voronoi tessellation-based method for discriminating crystallographic and biological protein-protein interactions.
about
The protein common interface database (ProtCID)--a comprehensive database of interactions of homologous proteins in multiple crystal formsUnderstanding the fabric of protein crystals: computational classification of biological interfaces and crystal contactsImpaired Protofibril Formation in Fibrinogen γN308K Is Due to Altered D:D and “A:a” Interactions ,How many protein-protein interactions types exist in nature?Assembly and Molecular Architecture of the Phosphoinositide 3-Kinase p85α Homodimer.Partner-aware prediction of interacting residues in protein-protein complexes from sequence data.A collaborative filtering approach for protein-protein docking scoring functions.Integrative structure-function mapping of the nucleoporin Nup133 suggests a conserved mechanism for membrane anchoring of the nuclear pore complexM-ORBIS: mapping of molecular binding sites and surfacesProtein interface classification by evolutionary analysis.Beta atomic contacts: identifying critical specific contacts in protein binding interfaces.In silico and in vitro studies on the protein-protein interactions between Brugia malayi immunomodulatory protein calreticulin and human C1q.Evidence of salicylic acid pathway with EDS1 and PAD4 proteins by molecular dynamics simulation for grape improvement.Use B-factor related features for accurate classification between protein binding interfaces and crystal packing contactsDynaFace: Discrimination between Obligatory and Non-obligatory Protein-Protein Interactions Based on the Complex's Dynamics.A structural dissection of large protein-protein crystal packing contacts.Exploiting conformational ensembles in modeling protein-protein interactions on the proteome scale.VLDP web server: a powerful geometric tool for analysing protein structures in their environment.A survey of available tools and web servers for analysis of protein-protein interactions and interfaces.Protein-protein interaction and quaternary structure.Discrimination between biological interfaces and crystal-packing contacts.PRince: a web server for structural and physicochemical analysis of protein-RNA interface.ProteinsPlus: a web portal for structure analysis of macromolecules.An unexpected way forward: towards a more accurate and rigorous protein-protein binding affinity scoring function by eliminating terms from an already simple scoring function.Unraveling the molecular architecture of a G protein-coupled receptor/β-arrestin/Erk module complex.DOMMINO 2.0: integrating structurally resolved protein-, RNA-, and DNA-mediated macromolecular interactions.Modeling protein quaternary structure of homo- and hetero-oligomers beyond binary interactions by homology.Critical residue that promotes protein dimerization: a story of partially exposed Phe25 in 14-3-3σ.Spontaneous non-canonical assembly of CcmK hexameric components from β-carboxysome shells of cyanobacteriaEffective discrimination between biologically relevant contacts and crystal packing contacts using new determinants.Rapid IgG heavy chain cleavage by the streptococcal IgG endopeptidase IdeS is mediated by IdeS monomers and is not due to enzyme dimerization.PDB-wide identification of biological assemblies from conserved quaternary structure geometry.Crystal structures of eukaryote glycosyltransferases reveal biologically relevant enzyme homooligomers.ClusPro-DC: Dimer Classification by the Cluspro Server for Protein-Protein Docking.Feature-based classification of native and non-native protein-protein interactions: Comparing supervised and semi-supervised learning approaches.
P2860
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P2860
DiMoVo: a Voronoi tessellation-based method for discriminating crystallographic and biological protein-protein interactions.
description
2008 nî lūn-bûn
@nan
2008年の論文
@ja
2008年学术文章
@wuu
2008年学术文章
@zh-cn
2008年学术文章
@zh-hans
2008年学术文章
@zh-my
2008年学术文章
@zh-sg
2008年學術文章
@yue
2008年學術文章
@zh
2008年學術文章
@zh-hant
name
DiMoVo: a Voronoi tessellation ...... protein-protein interactions.
@en
DiMoVo: a Voronoi tessellation ...... protein-protein interactions.
@nl
type
label
DiMoVo: a Voronoi tessellation ...... protein-protein interactions.
@en
DiMoVo: a Voronoi tessellation ...... protein-protein interactions.
@nl
prefLabel
DiMoVo: a Voronoi tessellation ...... protein-protein interactions.
@en
DiMoVo: a Voronoi tessellation ...... protein-protein interactions.
@nl
P2093
P2860
P356
P1433
P1476
DiMoVo: a Voronoi tessellation ...... protein-protein interactions.
@en
P2093
Anne Poupon
Francis Rodier
Julie Bernauer
Ranjit Prasad Bahadur
P2860
P304
P356
10.1093/BIOINFORMATICS/BTN022
P407
P50
P577
2008-01-19T00:00:00Z