A generalized Born formalism for heterogeneous dielectric environments: application to the implicit modeling of biological membranes.
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CHARMM: the biomolecular simulation programMolecular dynamics simulations of biological membranes and membrane proteins using enhanced conformational sampling algorithmsBiomolecular electrostatics and solvation: a computational perspectiveDesign and application of implicit solvent models in biomolecular simulationsMolecular determinants of epidermal growth factor binding: a molecular dynamics studyEfficient molecular mechanics simulations of the folding, orientation, and assembly of peptides in lipid bilayers using an implicit atomic solvation model.Discrimination of Native-like States of Membrane Proteins with Implicit Membrane-based Scoring Functions.Membrane protein native state discrimination by implicit membrane models.Modeling and simulation of ion channels.Determining the orientation of protegrin-1 in DLPC bilayers using an implicit solvent-membrane model.Membrane environment modulates the pKa values of transmembrane helicesEffect of membrane thickness on conformational sampling of phospholamban from computer simulations.APBSmem: a graphical interface for electrostatic calculations at the membrane.Implicit membrane treatment of buried charged groups: application to peptide translocation across lipid bilayers.Synthesis, biological, and biophysical studies of DAG-indololactones designed as selective activators of RasGRP.Transferring the PRIMO Coarse-Grained Force Field to the Membrane Environment: Simulations of Membrane Proteins and Helix-Helix Association.Probing the periplasmic-open state of lactose permease in response to sugar binding and proton translocationComputational studies of protegrin antimicrobial peptides: a review.Speed of conformational change: comparing explicit and implicit solvent molecular dynamics simulationsEquilibrium and folding simulations of NS4B H2 in pure water and water/2,2,2-trifluoroethanol mixed solvent: examination of solvation models.On the role of electrostatics in protein-protein interactions.Insights into the mechanism of C5aR inhibition by PMX53 via implicit solvent molecular dynamics simulations and dockingInteractions between ionizable amino acid side chains at a lipid bilayer-water interface.Interactions of amino acid side-chain analogs within membrane environments.On the energy components governing molecular recognition in the framework of continuum approachesInfluence of the membrane dipole potential on peptide binding to lipid bilayers.Testing physical models of passive membrane permeation.Molecular dynamics simulation of hydrated DPPC monolayers using charge equilibration force fieldsA method to determine dielectric constants in nonhomogeneous systems: application to biological membranesMembrane-mediated protein-protein interactions and connection to elastic models: a coarse-grained simulation analysis of gramicidin A association.Three-dimensional stress field around a membrane protein: atomistic and coarse-grained simulation analysis of gramicidin A.Distribution of amino acids in a lipid bilayer from computer simulations.Inclusion of lateral pressure/curvature stress effects in implicit membrane modelsRecent advances in implicit solvent-based methods for biomolecular simulationsChlorophylls, ligands and assembly of light-harvesting complexes in chloroplastsMolecular dynamics simulations of a DMPC bilayer using nonadditive interaction models.Charge equilibration force fields for lipid environments: applications to fully hydrated DPPC bilayers and DMPC-embedded gramicidin A.Recent advances in transferable coarse-grained modeling of proteins.Reaching new levels of realism in modeling biological macromolecules in cellular environments.Implicit solvent methods for free energy estimation.
P2860
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P2860
A generalized Born formalism for heterogeneous dielectric environments: application to the implicit modeling of biological membranes.
description
2005 nî lūn-bûn
@nan
2005年の論文
@ja
2005年学术文章
@wuu
2005年学术文章
@zh
2005年学术文章
@zh-cn
2005年学术文章
@zh-hans
2005年学术文章
@zh-my
2005年学术文章
@zh-sg
2005年學術文章
@yue
2005年學術文章
@zh-hant
name
A generalized Born formalism f ...... eling of biological membranes.
@en
A generalized Born formalism f ...... eling of biological membranes.
@nl
type
label
A generalized Born formalism f ...... eling of biological membranes.
@en
A generalized Born formalism f ...... eling of biological membranes.
@nl
prefLabel
A generalized Born formalism f ...... eling of biological membranes.
@en
A generalized Born formalism f ...... eling of biological membranes.
@nl
P2860
P356
P1476
A generalized Born formalism f ...... eling of biological membranes.
@en
P2093
Michael Feig
Seiichiro Tanizaki
P2860
P304
P356
10.1063/1.1865992
P407
P577
2005-03-01T00:00:00Z