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Isofunctional Protein Subfamily Detection Using Data Integration and Spectral ClusteringStructure-guided selection of specificity determining positions in the human KinomeHow accurate and statistically robust are catalytic site predictions based on closeness centrality?Exploring the structure and function paradigm.Assessment of ligand binding residue predictions in CASP8Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes.Protein interactions and ligand binding: from protein subfamilies to functional specificity.Supervised multivariate analysis of sequence groups to identify specificity determining residues.Clustering of protein domains for functional and evolutionary studiesComparing the functional roles of nonconserved sequence positions in homologous transcription repressors: implications for sequence/function analyses.A bioinformatics approach to the structure, function, and evolution of the nucleoprotein of the order mononegavirales.JDet: interactive calculation and visualization of function-related conservation patterns in multiple sequence alignments and structures.Functionally important positions can comprise the majority of a protein's architecture.Disentangling evolutionary signals: conservation, specificity determining positions and coevolution. Implication for catalytic residue predictionHigh-Resolution Identification of Specificity Determining Positions in the LacI Protein Family Using Ensembles of Sub-Sampled Alignments.Experimental identification of specificity determinants in the domain linker of a LacI/GalR protein: bioinformatics-based predictions generate true positives and false negatives.Accounting for epistatic interactions improves the functional analysis of protein structures.A survey on prediction of specificity-determining sites in proteins.Practical analysis of specificity-determining residues in protein families.Uncovering missing pieces: duplication and deletion history of arrestins in deuterostomes.Multi-Harmony: detecting functional specificity from sequence alignment.Assessment of ligand-binding residue predictions in CASP9.A Bioinformatics Analysis Reveals a Group of MocR Bacterial Transcriptional Regulators Linked to a Family of Genes Coding for Membrane ProteinsCharacterization and prediction of residues determining protein functional specificity.Identification of subfamily-specific sites based on active sites modeling and clustering.Bioinformatic analysis of protein families for identification of variable amino acid residues responsible for functional diversity.Intra-protein compensatory mutations analysis highlights the tRNA recognition regions in aminoacyl-tRNA synthetases.An update of DIVERGE software for functional divergence analysis of protein family.Recognition of sites of functional specialisation in all known eukaryotic protein kinase families.Effect of the sequence data deluge on the performance of methods for detecting protein functional residues.
P2860
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P2860
description
2006 nî lūn-bûn
@nan
2006年の論文
@ja
2006年学术文章
@wuu
2006年学术文章
@zh
2006年学术文章
@zh-cn
2006年学术文章
@zh-hans
2006年学术文章
@zh-my
2006年学术文章
@zh-sg
2006年學術文章
@yue
2006年學術文章
@zh-hant
name
Phylogeny-independent detection of functional residues.
@en
Phylogeny-independent detection of functional residues.
@nl
type
label
Phylogeny-independent detection of functional residues.
@en
Phylogeny-independent detection of functional residues.
@nl
prefLabel
Phylogeny-independent detection of functional residues.
@en
Phylogeny-independent detection of functional residues.
@nl
P356
P1433
P1476
Phylogeny-independent detection of functional residues.
@en
P2093
Alfonso Valencia
Florencio Pazos
P304
P356
10.1093/BIOINFORMATICS/BTL104
P407
P577
2006-03-21T00:00:00Z