about
Genome-wide RNA polymerase II profiles and RNA accumulation reveal kinetics of transcription and associated epigenetic changes during diurnal cyclesTetracyclines Disturb Mitochondrial Function across Eukaryotic Models: A Call for Caution in Biomedical ResearchChromosome-biased binding and gene regulation by the Caenorhabditis elegans DRM complexThe SIB Swiss Institute of Bioinformatics' resources: focus on curated databasesTopology and dynamics of the zebrafish segmentation clock core circuitConservation of transcription factor binding specificities across 600 million years of bilateria evolutionGETPrime 2.0: gene- and transcript-specific qPCR primers for 13 species including polymorphismsC. elegans tubby regulates life span and fat storage by two independent mechanismsIdentification and removal of low-complexity sites in allele-specific analysis of ChIP-seq data.Intestinal transport of the lactokinin Ala-Leu-Pro-Met-His-Ile-Arg through a Caco-2 Bbe monolayer.iSLIM: a comprehensive approach to mapping and characterizing gene regulatory networksMatrix and Steiner-triple-system smart pooling assays for high-performance transcription regulatory network mapping.WebPrInSeS: automated full-length clone sequence identification and verification using high-throughput sequencing data.Molecular ecological analysis of the succession and diversity of sulfate-reducing bacteria in the mouse gastrointestinal tractNatural variation in genome architecture among 205 Drosophila melanogaster Genetic Reference Panel lines.Coordinated effects of sequence variation on DNA binding, chromatin structure, and transcriptionAn evolutionarily conserved role for the aryl hydrocarbon receptor in the regulation of movement.Genomic variation and its impact on gene expression in Drosophila melanogaster.Global and stage specific patterns of Krüppel-associated-box zinc finger protein gene expression in murine early embryonic cellsA yeast one-hybrid and microfluidics-based pipeline to map mammalian gene regulatory networks.Identification of the transcription factor ZEB1 as a central component of the adipogenic gene regulatory network.A large-scale, in vivo transcription factor screen defines bivalent chromatin as a key property of regulatory factors mediating Drosophila wing development.A mammalian transcription factor-specific peptide repository for targeted proteomics.Genetic, molecular and physiological basis of variation in Drosophila gut immunocompetence.The Zic family homologue Odd-paired regulates Alk expression in DrosophilaTissue-specific enhancer repression through molecular integration of cell signaling inputsTranscriptional regulatory logic of the diurnal cycle in the mouse liver.Quantification of Cooperativity in Heterodimer-DNA Binding Improves the Accuracy of Binding Specificity Models.Complex expression dynamics and robustness in C. elegans insulin networks.Context-dependent transcriptional interpretation of mitogen activated protein kinase signaling in the Drosophila embryo.Chromatin immunoprecipitation (ChIP) coupled to detection by quantitative real-time PCR to study transcription factor binding to DNA in Caenorhabditis elegans.The C. elegans Snail homolog CES-1 can activate gene expression in vivo and share targets with bHLH transcription factors.Potential Direct Regulators of the Drosophila yellow Gene Identified by Yeast One-Hybrid and RNAi Screens.Dissecting the brown adipogenic regulatory network using integrative genomics.Systematic dissection of genomic features determining transcription factor binding and enhancer function.Genome-wide profiling of DNA-binding proteins using barcode-based multiplex Solexa sequencing.The Genetics of Transcription Factor DNA Binding Variation.Transcription factor proteomics-Tools, applications, and challenges.Gene regulatory mechanisms underlying the intestinal innate immune response.A systems perspective on brown adipogenesis and metabolic activation.
P50
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