Specific and non-specific interactions of integration host factor with DNA: thermodynamic evidence for disruption of multiple IHF surface salt-bridges coupled to DNA binding.
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Flexible DNA bending in HU-DNA cocrystal structuresStructure of Mth11/Mth Rpp29, an essential protein subunit of archaeal and eukaryotic RNase PShaping the Borrelia burgdorferi genome: crystal structure and binding properties of the DNA-bending protein HbbStructural and Thermodynamic Basis for Enhanced DNA Binding by a Promiscuous Mutant EcoRI EndonucleaseThe structure and selectivity of the SR protein SRSF2 RRM domain with RNAβ-Arm flexibility of HU from Staphylococcus aureus dictates the DNA-binding and recognition mechanismAnalytical Ultracentrifugation as a Tool to Study Nonspecific Protein-DNA InteractionsPhysical organization of DNA by multiple non-specific DNA-binding modes of integration host factor (IHF).Protein-DNA docking with a coarse-grained force field.Locus of enterocyte effacement-encoded regulator (Ler) of pathogenic Escherichia coli competes off histone-like nucleoid-structuring protein (H-NS) through noncooperative DNA binding.Mechanistic heterogeneity in site recognition by the structurally homologous DNA-binding domains of the ETS family transcription factors Ets-1 and PU.1.Analytic binding isotherms describing competitive interactions of a protein ligand with specific and nonspecific sites on the same DNA oligomer.Comparison of the effect of water release on the interaction of the Saccharomyces cerevisiae TATA binding protein (TBP) with "TATA Box" sequences composed of adenosine or inosine.Structure and dynamics of the DNA-binding protein HU of B. stearothermophilus investigated by Raman and ultraviolet-resonance Raman spectroscopyLarge favorable enthalpy changes drive specific RNA recognition by RNA recognition motif proteinsMolecular dissection of Mycobacterium tuberculosis integration host factor reveals novel insights into the mode of DNA binding and nucleoid compactionIntegration host factor assembly at the cohesive end site of the bacteriophage lambda genome: implications for viral DNA packaging and bacterial gene regulationDisruption and formation of surface salt bridges are coupled to DNA binding by the integration host factor: a computational analysisNucleosome accessibility governed by the dimer/tetramer interface.Global analysis of ion dependence unveils hidden steps in DNA binding and bending by integration host factor.Stepwise binding and bending of DNA by Escherichia coli integration host factor.Binding then bending: a mechanism for wrapping DNA.Analysis of the interaction with the hepatitis C virus mRNA reveals an alternative mode of RNA recognition by the human La proteinPressure dissociation of integration host factor-DNA complexes reveals flexibility-dependent structural variation at the protein-DNA interface.Structure-based analysis of HU-DNA binding.Molecular beacon-equilibrium cyclization detection of DNA-protein complexesTheoretical design of a new chimeric protein for the treatment of breast cancer.Differential temperature-dependent multimeric assemblies of replication and repair polymerases on DNA increase processivity.What drives proteins into the major or minor grooves of DNA?Crenarchaeal chromatin proteins Cren7 and Sul7 compact DNA by inducing rigid bends.Salt-mediated electrostatics in the association of TATA binding proteins to DNA: a combined molecular mechanics/Poisson-Boltzmann study.Thermodynamics of Rev-RNA interactions in HIV-1 Rev-RRE assembly.DNA protection by histone-like protein HU from the hyperthermophilic eubacterium Thermotoga maritima.Thermodynamics of tryptophan-mediated activation of the trp RNA-binding attenuation protein.Mechanosensing of DNA bending in a single specific protein-DNA complex.Making the bend: DNA tertiary structure and protein-DNA interactions.Quantitative characterization of conformational-specific protein-DNA binding using a dual-spectral interferometric imaging biosensor.E. coli SSB tetramer binds the first and second molecules of (dT)(35) with heat capacities of opposite sign.Salt bridge exchange binding mechanism between streptavidin and its DNA aptamer--thermodynamics and spectroscopic evidences.Charge neutralization and DNA bending by the Escherichia coli catabolite activator protein
P2860
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P2860
Specific and non-specific interactions of integration host factor with DNA: thermodynamic evidence for disruption of multiple IHF surface salt-bridges coupled to DNA binding.
description
2001 nî lūn-bûn
@nan
2001年の論文
@ja
2001年学术文章
@wuu
2001年学术文章
@zh
2001年学术文章
@zh-cn
2001年学术文章
@zh-hans
2001年学术文章
@zh-my
2001年学术文章
@zh-sg
2001年學術文章
@yue
2001年學術文章
@zh-hant
name
Specific and non-specific inte ...... ridges coupled to DNA binding.
@en
Specific and non-specific inte ...... ridges coupled to DNA binding.
@nl
type
label
Specific and non-specific inte ...... ridges coupled to DNA binding.
@en
Specific and non-specific inte ...... ridges coupled to DNA binding.
@nl
prefLabel
Specific and non-specific inte ...... ridges coupled to DNA binding.
@en
Specific and non-specific inte ...... ridges coupled to DNA binding.
@nl
P2093
P356
P1476
Specific and non-specific inte ...... ridges coupled to DNA binding.
@en
P2093
J A Holbrook
M T Record
O V Tsodikov
R M Saecker
P304
P356
10.1006/JMBI.2001.4768
P407
P577
2001-07-01T00:00:00Z