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A Predator Unmasked: Life Cycle of Bdellovibrio bacteriovorus from a Genomic PerspectiveComplete genome sequence and analysis of Wolinella succinogenesProtein relative abundance patterns associated with sucrose-induced dysbiosis are conserved across taxonomically diverse oral microcosm biofilm models of dental caries.Using Galaxy-P to leverage RNA-Seq for the discovery of novel protein variationsMulti-omic data analysis using Galaxy.Iron-sparing response of Mycobacterium avium subsp. paratuberculosis is strain dependent.Relative quantification: characterization of bias, variability and fold changes in mass spectrometry data from iTRAQ-labeled peptidesWorkflow for analysis of high mass accuracy salivary data set using MaxQuant and ProteinPilot search algorithm.Proteomic profiles in acute respiratory distress syndrome differentiates survivors from non-survivors.Flexible and accessible workflows for improved proteogenomic analysis using the Galaxy frameworkMetaproteomic analysis using the Galaxy framework.Characterizing Cardiac Molecular Mechanisms of Mammalian Hibernation via Quantitative Proteogenomics.Proteogenomic Analysis of a Hibernating Mammal Indicates Contribution of Skeletal Muscle Physiology to the Hibernation Phenotype.Deep metaproteomic analysis of human salivary supernatant.A two-step database search method improves sensitivity in peptide sequence matches for metaproteomics and proteogenomics studies.Proteome Profiling in Lung Injury after Hematopoietic Stem Cell Transplantation.Temporal quantitative proteomics by iTRAQ 2D-LC-MS/MS and corresponding mRNA expression analysis identify post-transcriptional modulation of actin-cytoskeleton regulators during TGF-beta-Induced epithelial-mesenchymal transition.Bronchoalveolar Lavage Fluid Protein Expression in Acute Respiratory Distress Syndrome Provides Insights into Pathways Activated in Subjects with Different Outcomes.Microbiomes - embracing complexity.Disseminating Metaproteomic Informatics Capabilities and Knowledge Using the Galaxy-P Framework.Early events of Bacillus anthracis germination identified by time-course quantitative proteomics.The Bdellovibrio bacteriovorus twin-arginine transport system has roles in predatory and prey-independent growth.Studies on the cytoplasmic protein tyrosine kinase activity of the Antarctic psychrotrophic bacterium Pseudomonas syringaeBAL Fluid Metaproteome in Acute Respiratory FailureImprove your Galaxy text life: The Query Tabular ToolUpdate on the moFF Algorithm for Label-Free Quantitative ProteomicsProgress and Challenges in Ocean Metaproteomics and Proposed Best Practices for Data SharingQuanTP: A Software Resource for Quantitative Proteo-Transcriptomic Comparative Data Analysis and InformaticsChallenges in Peptide-Spectrum Matching: A Robust and Reproducible Statistical Framework for Removing Low-Accuracy, High-Scoring HitsmetaQuantome: An Integrated, Quantitative Metaproteomics Approach Reveals Connections Between Taxonomy and Protein Function in Complex Microbiomes
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description
onderzoeker
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հետազոտող
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P31
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0000-0003-0984-0973