about
New principles of protein structure: nests, eggs--and what next?Inference of protein function from protein structure.Using correlated parameters for improved ranking of protein-protein docking decoys.The unique functional role of the C-HS hydrogen bond in the substrate specificity and enzyme catalysis of type 1 methionine aminopeptidase.The interrelationships of side-chain and main-chain conformations in proteins.PRUNE and PROBE--two modular web services for protein-protein docking.Molecular Dynamics Information Improves cis-Peptide-Based Function Annotation of Proteins.Identifying functionally important cis-peptide containing segments in proteins and their utility in molecular function annotation.Functionally important segments in proteins dissected using Gene Ontology and geometric clustering of peptide fragments.Numerical simulation of a glucose sensitive composite membrane closed-loop insulin delivery system.Chemical Shifts to Metabolic Pathways: Identifying Metabolic Pathways Directly from a Single 2D NMR Spectrum.Pipeline for inferring protein function from dynamics using coarse-grained molecular mechanics forcefield.Pattern Recognition-Based Approach for Identifying Metabolites in Nuclear Magnetic Resonance-Based Metabolomics.Functional linkages can reveal protein complexes for structure determination.Non-hydrogen bond interactions involving the methionine sulfur atom.De novo inference of protein function from coarse-grained dynamics.Two new atom centered fragment descriptors and scoring function enhance classification of antibacterial activity.Saccharomyces cerevisiae Hop1 protein zinc finger motif binds to the Holliday junction and distorts the DNA structure: implications for holliday junction migration.Assessment of Adaptive Breast Cancer Screening Policies for Improved Mortality Reduction in Low to Middle Income CountriesDifferent types of interactions involving cysteine sulfhydryl group in proteins.Computational design of model scaffold for anion recognition based on the 'Cα NN' motif.Combining Bayes classification and point group symmetry under Boolean framework for enhanced protein quaternary structure inference.Mass Spectrometry-Based Diagnosis of Hemoglobinopathies: A Potential Tool for the Screening of Genetic Disorder.New measures for estimating surface complementarity and packing at protein-protein interfaces.More hydrogen bonds for the (structural) biologist.Serum biomarkers identification by iTRAQ and verification by MRM: S100A8/S100A9 levels predict tumor-stroma involvement and prognosis in GlioblastomaExploring the use of molecular dynamics in assessing protein variants for phenotypic alterationsA proline insertion-deletion in the spike glycoprotein fusion peptide of mouse hepatitis virus strongly alters neuropathologyInteraction of arsenic with gap junction protein connexin 43 alters gap junctional intercellular communicationMolecular insights of inhibition in sickle hemoglobin polymerization upon glutathionylation: hydrogen/deuterium exchange mass spectrometry and molecular dynamics simulation-based approachCis peptide bonds in proteins: residues involved, their conformations, interactions and locationsConformational similarity indices between different residues in proteins and alpha-helix propensitiesbeta-sheet propensity and its correlation with parameters based on conformationTerminal residues in protein chains: residue preference, conformation, and interactionConformational properties of alpha-tubulin tail peptide: implications for tail-body interactionEstimates of the loss of main-chain conformational entropy of different residues on protein foldingPacking of aromatic rings against tryptophan residues in proteinsGraphical representation of the salient conformational features of protein residuesInferring molecular function: contributions from functional linkagesdockYard--a repository to assist modeling of protein-protein docking
P50
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P50
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onderzoeker
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researcher
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հետազոտող
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Debnath Pal
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Debnath Pal
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Debnath Pal
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Debnath Pal
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Debnath Pal
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Debnath Pal
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Debnath Pal
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Debnath Pal
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Debnath Pal
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Debnath Pal
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Debnath Pal
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Debnath Pal
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P106
P31
P496
0000-0002-3591-5978