Comparison of DNA extraction methods for microbial community profiling with an application to pediatric bronchoalveolar lavage samples
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Republished: Respiratory microbiota: addressing clinical questions, informing clinical practiceNext generation sequencing data of a defined microbial mock community.The respiratory microbiome: an underappreciated player in the human response to inhaled pollutants?Evaluation of Lysis Methods for the Extraction of Bacterial DNA for Analysis of the Vaginal MicrobiotaDeriving accurate microbiota profiles from human samples with low bacterial content through post-sequencing processing of Illumina MiSeq data.Challenges in the culture-independent analysis of oral and respiratory samples from intubated patients.Technicalities and Glitches of Terminal Restriction Fragment Length Polymorphism (T-RFLP).Impact of enzymatic digestion on bacterial community composition in CF airway samples.The respiratory microbiome in idiopathic pulmonary fibrosis.16S rRNA gene pyrosequencing of reference and clinical samples and investigation of the temperature stability of microbiome profiles.Genotypes and phenotypes of Shiga toxin-producing Escherichia coli (STEC) in Abeokuta, Southwestern NigeriaA direct PCR approach to accelerate analyses of human-associated microbial communitiesDNA extraction protocols cause differences in 16S rRNA amplicon sequencing efficiency but not in community profile composition or structure.Assessing the accuracy of quantitative molecular microbial profilingRespiratory microbiota: addressing clinical questions, informing clinical practice.Investigating the impact of storage conditions on microbial community composition in soil samplesEffect of DNA extraction methods and sampling techniques on the apparent structure of cow and sheep rumen microbial communities.Mapping axillary microbiota responsible for body odours using a culture-independent approach.Stability and phylogenetic correlation in gut microbiota: lessons from ants and apes.Survival of prokaryotes in a polluted waste dump during remediation by alkaline hydrolysis.Influence of DNA extraction on oral microbial profiles obtained via 16S rRNA gene sequencingRNA preservation agents and nucleic acid extraction method bias perceived bacterial community compositionThe development and application of a molecular community profiling strategy to identify polymicrobial bacterial DNA in the whole blood of septic patientsEvaluating DNA Extraction Methods for Community Profiling of Pig Hindgut Microbial CommunityDecontamination of 16S rRNA gene amplicon sequence datasets based on bacterial load assessment by qPCRComparison of DNA extraction methods in analysis of salivary bacterial communitiesMetagenomic Characterization of Microbial Communities In Situ Within the Deeper Layers of the Ileum in Crohn's Disease.Molecular diagnosis of Actinomadura madurae infection by 16S rRNA deep sequencing.Deep sequencing of evolving pathogen populations: applications, errors, and bioinformatic solutions.Single clinical isolates from acute uncomplicated urinary tract infections are representative of dominant in situ populations.From deep sequencing to viral tagging: recent advances in viral metagenomics.The airway microbiota in early cystic fibrosis lung disease.A Different Microbiome Gene Repertoire in the Airways of Cystic Fibrosis Patients with Severe Lung Disease.The Role of the Skin Microbiome in Atopic Dermatitis: A Systematic Review.Comparative analysis of DNA extraction methods to study the body surface microbiota of insects: A case study with ant cuticular bacteria.Clinical metagenomics of bone and joint infections: a proof of concept study.Expression, purification and immobilization of tannase from Staphylococcus lugdunensis MTCC 3614.Reptile-associated Borrelia species in the goanna tick (Bothriocroton undatum) from Sydney, Australia.The Lung Microbiome in Idiopathic Pulmonary Fibrosis: A Promising Approach for Targeted Therapies.Utility of Conventional Culture and MALDI-TOF MS for Identification of Microbial Communities in Bronchoalveolar Lavage Fluid in Comparison with the GS Junior Next Generation Sequencing System.
P2860
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P2860
Comparison of DNA extraction methods for microbial community profiling with an application to pediatric bronchoalveolar lavage samples
description
2012 nî lūn-bûn
@nan
2012 թուականին հրատարակուած գիտական յօդուած
@hyw
2012 թվականին հրատարակված գիտական հոդված
@hy
2012年の論文
@ja
2012年論文
@yue
2012年論文
@zh-hant
2012年論文
@zh-hk
2012年論文
@zh-mo
2012年論文
@zh-tw
2012年论文
@wuu
name
Comparison of DNA extraction m ...... bronchoalveolar lavage samples
@ast
Comparison of DNA extraction m ...... bronchoalveolar lavage samples
@en
Comparison of DNA extraction m ...... bronchoalveolar lavage samples
@en-gb
Comparison of DNA extraction m ...... bronchoalveolar lavage samples
@nl
type
label
Comparison of DNA extraction m ...... bronchoalveolar lavage samples
@ast
Comparison of DNA extraction m ...... bronchoalveolar lavage samples
@en
Comparison of DNA extraction m ...... bronchoalveolar lavage samples
@en-gb
Comparison of DNA extraction m ...... bronchoalveolar lavage samples
@nl
prefLabel
Comparison of DNA extraction m ...... bronchoalveolar lavage samples
@ast
Comparison of DNA extraction m ...... bronchoalveolar lavage samples
@en
Comparison of DNA extraction m ...... bronchoalveolar lavage samples
@en-gb
Comparison of DNA extraction m ...... bronchoalveolar lavage samples
@nl
P2093
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Comparison of DNA extraction m ...... bronchoalveolar lavage samples
@en
P2093
Dana Willner
David Whiley
Joshua Daly
Keith Grimwood
P2860
P304
P3181
P356
10.1371/JOURNAL.PONE.0034605
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P577
2012-01-01T00:00:00Z