OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy
about
Inferring Orthologs: Open Questions and PerspectivesLearning from Co-expression Networks: Possibilities and ChallengesComparative Life Cycle Transcriptomics Revises Leishmania mexicana Genome Annotation and Links a Chromosome Duplication with Parasitism of VertebratesThe genome of the crustacean Parhyale hawaiensis, a model for animal development, regeneration, immunity and lignocellulose digestionPlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plantsDietary nitrogen alters codon bias and genome composition in parasitic microorganismsCRISPR System Acquisition and Evolution of an Obligate Intracellular Chlamydia-Related BacteriumGiant viruses with an expanded complement of translation system componentsElucidating and mining the Tulipa and Lilium transcriptomes.Heterogeneous molecular processes among the causes of how sequence similarity scores can fail to recapitulate phylogeny.The Agassiz's desert tortoise genome provides a resource for the conservation of a threatened species.Candidate regulators of Early Leaf Development in Maize Perturb Hormone Signalling and Secondary Cell Wall Formation When Constitutively Expressed in Rice.Evidence for an Opportunistic and Endophytic Lifestyle of the Bursaphelenchus xylophilus-Associated Bacteria Serratia marcescens PWN146 Isolated from Wilting Pinus pinaster.Gene family expansions and contractions are associated with host range in plant pathogens of the genus ColletotrichumA De Novo Genome Sequence Assembly of the Arabidopsis thaliana Accession Niederzenz-1 Displays Presence/Absence Variation and Strong SyntenyEvolution of floral diversity: genomics, genes and gamma.Comparative genomics provides a timeframe for Wolbachia evolution and exposes a recent biotin synthesis operon transfer.Genomes of Fasciola hepatica from the Americas Reveal Colonization with Neorickettsia Endobacteria Related to the Agents of Potomac Horse and Human Sennetsu Fevers.An annotated draft genome for Radix auricularia (Gastropoda, Mollusca).Preferential expression of scores of functionally and evolutionarily diverse DNA and RNA-binding proteins during Oxytricha trifallax macronuclear development.Orthograph: a versatile tool for mapping coding nucleotide sequences to clusters of orthologous genes.Comparative transcriptome analyses of flower development in four species of Achimenes (Gesneriaceae).Molecular mechanisms of thermal resistance of the insect trypanosomatid Crithidia thermophila.OrthoFiller: utilising data from multiple species to improve the completeness of genome annotationsDetecting early signs of heat and drought stress in Phoenix dactylifera (date palm).Independent and Parallel Evolution of New Genes by Gene Duplication in Two Origins of C4 Photosynthesis Provides New Insight into the Mechanism of Phloem Loading in C4 Species.De novo transcriptome assembly and analysis of differentially expressed genes of two barley genotypes reveal root-zone-specific responses to salt exposure.The Genome of the Self-Fertilizing Mangrove Rivulus Fish, Kryptolebias marmoratus: A Model for Studying Phenotypic Plasticity and Adaptations to Extreme Environments.Cilium transition zone proteome reveals compartmentalization and differential dynamics of ciliopathy complexes.Characterization of a male reproductive transcriptome for Peromyscus eremicus (Cactus mouse).Gene Turnover Contributes to the Evolutionary Adaptation of Acidithiobacillus caldus: Insights from Comparative Genomics.Genome Sequence of Phytomonas françai, a Cassava (Manihot esculenta) Latex Parasite.Genetic Characterization of the Exceptionally High Heat Resistance of the Non-toxic Surrogate Clostridium sporogenes PA 3679.Evolutionary Dynamics of Pathoadaptation Revealed by Three Independent Acquisitions of the VirB/D4 Type IV Secretion System in BartonellaCross-Species Genome-Wide Identification of Evolutionary Conserved MicroProteins.Draft Genome Sequence of Diplodia seriata F98.1, a Fungal Species Involved in Grapevine Trunk Diseases.Culture-independent genomics of a novel chlamydial pathogen of fish provides new insight into host-specific adaptations utilized by these intracellular bacteria.Plant genome and transcriptome annotations: from misconceptions to simple solutions.Towards Consensus Gene Ages.Evolutionarily Conserved Alternative Splicing Across Monocots.
P2860
Q26766407-56A05D86-A6CB-4048-B3DA-4B72988FB039Q27015436-F623BB9E-C732-45DF-8994-A7CD3DB5E612Q28550169-1801EF4B-C490-4AF5-8623-72519912CEC2Q28595687-C80E9EB4-6341-40EA-9947-774DCB7C3EE4Q28818092-F2CE4659-1D15-47F0-9659-878AAB176E7FQ28821402-D9A66182-07EF-4C71-A6BB-F0D70009E5BAQ28831366-23FD2854-5F6B-4553-8C31-7C689BA63329Q29220832-B696B90A-8B44-4716-9893-46AFFF83C387Q30489538-65F62E33-4B65-4234-883E-3A2D77850EF3Q33675296-32FE3714-0804-40CB-8BD3-2133614B8DE1Q33745772-08E8632F-C392-43C2-8B31-DB6E124A9F2DQ33867023-2DDE0488-6518-49B5-AC27-C0C29418B124Q36086746-F04A30EC-5B80-4DA5-BCEE-037529802B36Q36096496-232FEFB9-C1DD-4C9D-984F-536D985774A2Q36155081-FB75654A-F919-499F-BFF3-98545ABA5B36Q36228952-1449B73C-56E3-449D-A493-6A50D252B6A5Q36231088-AC0ECABC-C095-4DCE-95B9-EEBBFDBB4B4BQ36242549-0B790694-ED33-45DA-B7DB-F3F95C5DAD59Q36282026-75CA2234-5567-4960-A242-5F57E17B8B45Q36282483-26A992E3-FD7F-4ADD-8647-DA18DC50004DQ36283309-B094952F-4650-4AD3-A41B-A10C025A4111Q36315212-F61C9B88-7EE5-4E42-9C2E-B63C92B43BE8Q36318429-37E13297-AC89-46F6-B690-F6DE0845A0D1Q36375842-CD2383B9-FE1F-4855-AD74-9D77E94625DDQ36389552-54EF82A6-A999-488D-82B8-DDB3FD2CA42FQ37025079-267BE545-8A0F-4BFA-A5DE-8A929716063EQ37177125-640EDDCB-2A9F-47FE-B68B-FA06FA842C8DQ37180351-BBFE5E66-6B60-461C-9BC5-FDC0590E1A88Q37258669-8F81E12B-E030-4E8A-B96C-EDF873F78E8DQ37383299-381E49C6-EBE5-467E-BC3F-54ABEC61D12BQ37475453-24E76A75-8542-41EA-AAA9-423D8296ECA9Q37599739-057C6855-D1B9-41AD-9E3A-A43FB33D21E8Q37733736-FA923F9C-F344-43EB-B87F-04E80DB5A81FQ37738564-72180DB7-5B9C-4F1D-A5E5-BA803ABD7C10Q37738575-A883BFDB-58DB-429C-9641-BDA29E5C1AB6Q37740868-AD15DEC4-117F-4EC8-901D-D2538858D867Q37834930-92A0589C-2E1A-43B9-B7C5-2BD6D40EFF78Q38438346-295F32DB-A69E-4F85-A765-6804C77BB59AQ38446542-ACB1CAF8-566C-4E04-9864-F1327D4FC01FQ38609470-741250F3-F1B9-4431-8949-A0C273AD0300
P2860
OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy
description
2015 nî lūn-bûn
@nan
2015 թուականին հրատարակուած գիտական յօդուած
@hyw
2015 թվականին հրատարակված գիտական հոդված
@hy
2015年の論文
@ja
2015年論文
@yue
2015年論文
@zh-hant
2015年論文
@zh-hk
2015年論文
@zh-mo
2015年論文
@zh-tw
2015年论文
@wuu
name
OrthoFinder: solving fundament ...... orthogroup inference accuracy
@ast
OrthoFinder: solving fundament ...... orthogroup inference accuracy
@en
OrthoFinder: solving fundament ...... orthogroup inference accuracy
@en-gb
OrthoFinder: solving fundament ...... orthogroup inference accuracy
@nl
type
label
OrthoFinder: solving fundament ...... orthogroup inference accuracy
@ast
OrthoFinder: solving fundament ...... orthogroup inference accuracy
@en
OrthoFinder: solving fundament ...... orthogroup inference accuracy
@en-gb
OrthoFinder: solving fundament ...... orthogroup inference accuracy
@nl
prefLabel
OrthoFinder: solving fundament ...... orthogroup inference accuracy
@ast
OrthoFinder: solving fundament ...... orthogroup inference accuracy
@en
OrthoFinder: solving fundament ...... orthogroup inference accuracy
@en-gb
OrthoFinder: solving fundament ...... orthogroup inference accuracy
@nl
P2860
P3181
P1433
P1476
OrthoFinder: solving fundament ...... orthogroup inference accuracy
@en
P2860
P2888
P3181
P356
10.1186/S13059-015-0721-2
P407
P577
2015-01-01T00:00:00Z
P5875
P6179
1026229827