Query-dependent banding (QDB) for faster RNA similarity searches - Test2 - elhamkhani - TriplyDB

Query-dependent banding (QDB) for faster RNA similarity searches

Query-dependent banding (QDB) for faster RNA similarity searches

http://www.wikidata.org/entity/Q21563508

about

A probabilistic model of local sequence alignment that simplifies statistical significance estimation Study of inter- and intra-individual variations in the salivary microbiota A lover and a fighter: the genome sequence of an entomopathogenic nematode Heterorhabditis bacteriophora RNAG: a new Gibbs sampler for predicting RNA secondary structure for unaligned sequences Structator: fast index-based search for RNA sequence-structure patterns Infernal 1.0: inference of RNA alignments GISSD: Group I Intron Sequence and Structure Database Identification of differentially expressed small non-coding RNAs in the legume endosymbiont Sinorhizobium meliloti by comparative genomics Rfam: updates to the RNA families database U7 snRNAs: a computational survey Extensive sequence divergence between the reference genomes of two elite indica rice varieties Zhenshan 97 and Minghui 63 Annual Removal of Aboveground Plant Biomass Alters Soil Microbial Responses to Warming Ambivalent covariance models Annotating RNA motifs in sequences and alignments nhmmer: DNA homology search with profile HMMs Bacterial communities in women with bacterial vaginosis: high resolution phylogenetic analyses reveal relationships of microbiota to clinical criteria Characterization of Metabolically Active Bacterial Populations in Subseafloor Nankai Trough Sediments above, within, and below the Sulfate-Methane Transition Zone Fast filtering for RNA homology search The tedious task of finding homologous noncoding RNA genes The Ribosomal Database Project: improved alignments and new tools for rRNA analysis SeqFold: genome-scale reconstruction of RNA secondary structure integrating high-throughput sequencing data.Computational identification of functional RNA homologs in metagenomic data.Lentibacillus garicola sp. nov., isolated from myeolchi-aekjeot, a Korean fermented anchovy sauce.Response of archaeal communities in the rhizosphere of maize and soybean to elevated atmospheric CO2 concentrations.Rheinheimera gaetbuli sp. nov., a Marine Bacterium Isolated from a Tidal Flat.Shape based indexing for faster search of RNA family databases.Searching for evolutionary distant RNA homologs within genomic sequences using partition function posterior probabilities Discovering cis-regulatory RNAs in Shewanella genomes by Support Vector Machines Evolutionary modeling and prediction of non-coding RNAs in Drosophila Comparative analysis of pyrosequencing and a phylogenetic microarray for exploring microbial community structures in the human distal intestine.Evolutionary triplet models of structured RNA Riboswitch detection using profile hidden Markov models.Draft Genome Sequence of the Potassium Feldspar-Solubilizing Bacterium Ensifer adhaerens L18.Phylogenetic and metabolic diversity of bacteria associated with cystic fibrosis.Characterization of archaeal community in contaminated and uncontaminated surface stream sediments.Adjacent nucleotide dependence in ncRNA and order-1 SCFG for ncRNA identification.Mercury and other heavy metals influence bacterial community structure in contaminated Tennessee streams Taking root: enduring effect of rhizosphere bacterial colonization in mangroves Genome-Wide Detection of Small Regulatory RNAs in Deep-Sea Bacterium Shewanella piezotolerans WP3 Reproducibility and quantitation of amplicon sequencing-based detection

P2860

Q21092573-19FA769E-2793-443A-A1C9-994B3572D68C Q21267214-8A0E374E-3A69-4283-9E02-93001C7AB64D Q22065242-68D53C56-A6F4-4935-96E8-EA292D0FEBE0 Q24604545-64AF462F-56B8-4098-B6BC-8302124E18E2 Q24619347-A7110D48-3990-4AC5-91EB-465351F4E2E5 Q24646921-1011726D-FC2E-48E0-8DE9-3353AB4D14F5 Q24649946-102C60D8-BD5E-437C-A579-34E29BBBBFBF Q24653390-4C9D27E9-A4F0-4517-A6B8-0F4A407B6836 Q24655855-B0DABBA6-89F6-4F25-9229-1AD55E6AE2F1 Q28268371-5D33431A-EED2-426F-A1BB-288291DD398E Q28595711-CF4C03AE-DFC3-4560-BD45-76F986F3E6F7 Q28598304-4B601D29-200E-4DD4-B855-7BE11A975038 Q28646964-5D7C7240-B1B1-446A-8A14-E6FFD6893BDF Q28649737-8C067AA1-E729-4F6F-8386-BC516CEE4530 Q28680678-FF3FF81C-8970-4D6B-A560-5368FC0003C9 Q28728308-7439538E-AD9F-4E14-8A2F-D6DC0B5FBBBB Q28730804-BC0DF41A-C8C0-4B31-8929-6D2BE6D60E1A Q28743147-7FA507F1-2829-40CF-B3C7-18CF11F0551F Q28750040-4D1AB2C2-369F-4FB9-8034-92B722EFF2CA Q29547434-37D4828E-4478-482F-A830-66EE7DF9DF8E Q30573346-F76BD35B-9B89-4BEC-8DC1-26DA04607718 Q30636562-2516230B-BE4C-4E60-894A-3690667B45BD Q30926654-39F8298C-8676-497C-92D3-8FD34578F00F Q30995121-4E815BEE-6E1A-42CE-A7B7-0AF0CC01FD56 Q31031770-E5D8FB54-B813-4C4E-BED8-25907E4FC1F8 Q31148236-C2D1FF18-EBEC-4D9C-94F7-4C56C20A80A1 Q33316856-4495340A-B9B2-44DE-B5EB-6749711D6BB5 Q33426376-46EE60F6-ECED-4F97-9784-A105C7D9A418 Q33492330-F05870A8-1FA7-4E17-9695-D1C3FB25D36F Q33495184-3BED1582-2449-47F3-97F9-C065743D2CFA Q33497902-6D034C2A-09D8-4617-A64E-D9946FB2453F Q33509394-07597D94-8A81-48A6-905B-71F8BC27E595 Q33611737-2A118AFB-D5D7-4D3D-A1A9-AD88AF18497C Q33633034-6339CB25-BE17-47C7-B998-E160D2B2D803 Q33666980-CF5E2076-F766-41A3-88B5-42F32DF38AF2 Q33712143-1018977F-B750-4940-8087-9E200D4CFB9F Q33740511-4E798608-3B61-44A5-A8FA-3801399A0291 Q33761165-3A7A1E85-66C8-42C7-B075-1F9F804E424A Q33799810-35417ADE-9F35-4BF5-B382-F3645C995009 Q33827930-6D4DE356-6854-46C9-904E-8AFDD40B39BD

P2860

Query-dependent banding (QDB) for faster RNA similarity searches

http://www.wikidata.org/entity/Q21563508

description

2007 nî lūn-bûn

@nan

2007 թուականի Մարտին հրատարակուած գիտական յօդուած

@hyw

2007 թվականի մարտին հրատարակված գիտական հոդված

@hy

2007年の論文

@ja

2007年論文

@yue

2007年論文

@zh-hant

2007年論文

@zh-hk

2007年論文

@zh-mo

2007年論文

@zh-tw

2007年论文

@wuu

name

Query-dependent banding (QDB) for faster RNA similarity searches

@ast

Query-dependent banding (QDB) for faster RNA similarity searches

@en

Query-dependent banding (QDB) for faster RNA similarity searches

@en-gb

Query-dependent banding (QDB) for faster RNA similarity searches

@nl

type

label

Query-dependent banding (QDB) for faster RNA similarity searches

@ast

Query-dependent banding (QDB) for faster RNA similarity searches

@en

Query-dependent banding (QDB) for faster RNA similarity searches

@en-gb

Query-dependent banding (QDB) for faster RNA similarity searches

@nl

altLabel

Query-Dependent Banding (QDB) for Faster RNA Similarity Searches

@en

prefLabel

Query-dependent banding (QDB) for faster RNA similarity searches

@ast

Query-dependent banding (QDB) for faster RNA similarity searches

@en

Query-dependent banding (QDB) for faster RNA similarity searches

@en-gb

Query-dependent banding (QDB) for faster RNA similarity searches

@nl

P1433

Q21563508-663E12CB-E028-4EA7-B3B5-FFA769A439FD

P1476

Q21563508-AD9F8409-249A-41B9-A0C5-E6949C9A1A51

P2093

Q21563508-3E6F713A-986C-4729-9C52-4C5C0D6A8137

P2860

Q21563508-10F5ADD3-AC84-40CD-AC47-4937E5EE2AAB

Q21563508-1454588F-D44E-4C9F-B9E1-026646A6F0D2

Q21563508-1E3D364A-83E4-4FD9-A79A-A49915869C4F

Q21563508-1F4E9278-DDCB-4DC6-9272-4AEB63A583EE

Q21563508-20086A7E-AB0C-4FDE-95A4-6C74DCC5D579

Q21563508-23EE09DA-4222-4CD1-9912-C6B29F9E5F96

Q21563508-29A0B62F-2941-48FA-A056-607FBDF53CB5

Q21563508-2B064D47-C002-4AF6-ABE4-D50D9E776CF4

Q21563508-2FC9A699-795D-4E1D-8452-1D1C0FC3D33A

Q21563508-3A3FE61C-9947-4A6B-AAE0-29E630E7586A

P304

Q21563508-80E6BC2D-1564-4BA8-BB0B-A6E2748831CC

P31

Q21563508-2A217049-B432-47D3-9D9F-49EEFAA3AF88

P3181

Q21563508-2127D7CC-7272-4F65-8DD7-5E8D67F6A851

P356

Q21563508-D006DEC0-7052-40BC-A5E7-3A098CA0A540

P4011

Q21563508-6FC39CE1-1ACB-413C-AE2F-E89BE6D40F6C

P407

Q21563508-FE954198-5708-42CB-B624-C3F2A98F569F

P433

Q21563508-5DA3CF50-5460-42B0-8FBF-0B30EEF54A8A

P478

Q21563508-13667C07-8256-406B-8313-3E63B7D20A30

P50

Q21563508-D22BED68-8AAC-4B1F-8A68-BCCCA609340E

P577

Q21563508-4B2873F4-2D1F-468F-83B4-51B9AE5D1039

P5875

Q21563508-757B89DD-F0DB-4C17-9AF6-BD8D2648AD32

P698

Q21563508-A3C0A766-F0E6-41C3-8B7E-541FC29A59FD

P932

Q21563508-E4AEB3A0-132B-467D-98A2-89FCF72CB22C

P3181

P356

JOURNAL.PCBI.0030056

P1433

PLOS Computational Biology

P1476

Query-dependent banding (QDB) for faster RNA similarity searches

@en

P2093

Eric P Nawrocki

http://www.w3.org/2001/XMLSchema#string

P2860

Computational identification of Drosophila microRNA genes

A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure

A computational screen for mammalian pseudouridylation guide H/ACA RNAs

Prediction of signal recognition particle RNA genes.

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

Rfam: annotating non-coding RNAs in complete genomes

Applications and statistics for multiple high-scoring segments in molecular sequences

RNA sequence analysis using covariance models

ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences

P304

e56

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P3181

137554

http://www.w3.org/2001/XMLSchema#string

P356

10.1371/JOURNAL.PCBI.0030056

http://www.w3.org/2001/XMLSchema#string

P4011

c8c418a14b15403b1003502bec8c6be4218d6d30

http://www.w3.org/2001/XMLSchema#string

P407

P433

3

http://www.w3.org/2001/XMLSchema#string

P478

3

http://www.w3.org/2001/XMLSchema#string

P50

P577

2007-03-30T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

6416706

http://www.w3.org/2001/XMLSchema#string

P698

17397253

http://www.w3.org/2001/XMLSchema#string

P932

1847999

http://www.w3.org/2001/XMLSchema#string