Unique features of the loblolly pine (Pinus taeda L.) megagenome revealed through sequence annotation - Test2 - elhamkhani - TriplyDB

Unique features of the loblolly pine (Pinus taeda L.) megagenome revealed through sequence annotation

Unique features of the loblolly pine (Pinus taeda L.) megagenome revealed through sequence annotation

http://www.wikidata.org/entity/Q22065125

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Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies Sequencing and assembly of the 22-gb loblolly pine genome Next Generation Sequencing Technologies: The Doorway to the Unexplored Genomics of Non-Model Plants Draft genome of the living fossil Ginkgo biloba Transcriptome responses to temperature, water availability and photoperiod are conserved among mature trees of two divergent Douglas-fir provenances from a coastal and an interior habitat Combined de novo and genome guided assembly and annotation of the Pinus patula juvenile shoot transcriptome De Novo Regulatory Motif Discovery Identifies Significant Motifs in Promoters of Five Classes of Plant Dehydrin Genes.The draft genome of Ruellia speciosa (Beautiful Wild Petunia: Acanthaceae).Timber! Felling the loblolly pine genome Evolution of gene structure in the conifer Picea glauca: a comparative analysis of the impact of intron size.Genetic linkage map construction and QTL identification of juvenile growth traits in Torreya grandis.Optimization of the genotyping-by-sequencing strategy for population genomic analysis in conifers.De Novo Transcriptome Sequencing Analysis of cDNA Library and Large-Scale Unigene Assembly in Japanese Red Pine (Pinus densiflora).Comparative in silico analysis of SSRs in coding regions of high confidence predicted genes in Norway spruce (Picea abies) and Loblolly pine (Pinus taeda).A call for benchmarking transposable element annotation methods.A Consensus Genetic Map for Pinus taeda and Pinus elliottii and Extent of Linkage Disequilibrium in Two Genotype-Phenotype Discovery Populations of Pinus taeda.What's in a genome? The C-value enigma and the evolution of eukaryotic genome content Exome genotyping, linkage disequilibrium and population structure in loblolly pine (Pinus taeda L.).Genetic mapping of Pinus flexilis major gene (Cr4) for resistance to white pine blister rust using transcriptome-based SNP genotyping.Linkage and Association Mapping for Two Major Traits Used in the Maritime Pine Breeding Program: Height Growth and Stem Straightness.The gene expression landscape of pine seedling tissues.Assessing the Gene Content of the Megagenome: Sugar Pine (Pinus lambertiana).Landscape of Fluid Sets of Hairpin-Derived 21-/24-nt-Long Small RNAs at Seed Set Uncovers Special Epigenetic Features in Picea glauca.Insights into conifer giga-genomes.Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size.Genomic variation across landscapes: insights and applications.Genomic exploration and molecular marker development in a large and complex conifer genome using RADseq and mRNAseq.Conservation and divergence of gene expression plasticity following c. 140 million years of evolution in lodgepole pine (Pinus contorta) and interior spruce (Picea glauca×Picea engelmannii).Conifer genomics and adaptation: at the crossroads of genetic diversity and genome function.Profiling methyl jasmonate-responsive transcriptome for understanding induced systemic resistance in whitebark pine (Pinus albicaulis).An epigenetic toolkit allows for diverse genome architectures in eukaryotes.Sequence of the Sugar Pine Megagenome.A high-resolution reference genetic map positioning 8.8 K genes for the conifer white spruce: structural genomics implications and correspondence with physical distance.A Guide to the PLAZA 3.0 Plant Comparative Genomic Database.Revisiting the phosphatidylethanolamine-binding protein (PEBP) gene family reveals cryptic FLOWERING LOCUS T gene homologs in gymnosperms and sheds new light on functional evolution.Short interspersed nuclear elements (SINEs) are abundant in Solanaceae and have a family-specific impact on gene structure and genome organization.An Introduction to Genome Annotation.Genomics innovation: transforming healthcare, business, and the global economy.Transcription through the eye of a needle: daily and annual cyclic gene expression variation in Douglas-fir needles.Saturated genic SNP mapping identified functional candidates and selection tools for the Pinus monticola Cr2 locus controlling resistance to white pine blister rust.

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Unique features of the loblolly pine (Pinus taeda L.) megagenome revealed through sequence annotation

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2014 nî lūn-bûn

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2014 թուականի Մարտին հրատարակուած գիտական յօդուած

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2014 թվականի մարտին հրատարակված գիտական հոդված

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2014年の論文

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Unique features of the lobloll ...... ed through sequence annotation

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Aleksey V Zimin

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Brian Y Lin

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Carol A Loopstra

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P2860

Automated generation of heuristics for biological sequence comparison

Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies

Targeted isolation, sequence assembly and characterization of two white spruce (Picea glauca) BAC clones for terpenoid synthase and cytochrome P450 genes involved in conifer defence reveal insights into a conifer genome

Gene finding in novel genomes

Assembling the 20 Gb white spruce (Picea glauca) genome from whole-genome shotgun sequencing data

Sequencing and assembly of the 22-gb loblolly pine genome

Loss of all ndh genes as determined by sequencing the entire chloroplast genome of the black pine Pinus thunbergii

The genome of the cucumber, Cucumis sativus L

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891-909

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3

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196

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Keithanne Mockaitis

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2014-03-01T00:00:00Z

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260999401

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