Scaffolding a Caenorhabditis nematode genome with RNA-seq - Test2 - elhamkhani - TriplyDB

Scaffolding a Caenorhabditis nematode genome with RNA-seq

Scaffolding a Caenorhabditis nematode genome with RNA-seq

http://www.wikidata.org/entity/Q22065770

about

A lover and a fighter: the genome sequence of an entomopathogenic nematode Heterorhabditis bacteriophora Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes The draft genome of the carcinogenic human liver fluke Clonorchis sinensis The genome of Romanomermis culicivorax: revealing fundamental changes in the core developmental genetic toolkit in Nematoda The genome and transcriptome of the zoonotic hookworm Ancylostoma ceylanicum identify infection-specific gene families Evolution of New cis-Regulatory Motifs Required for Cell-Specific Gene Expression in Caenorhabditis Identification of DVA interneuron regulatory sequences in Caenorhabditis elegans Phylogenomic and biogeographic reconstruction of the Trichinella complex The evolution of parasitism in Nematoda Toward 959 nematode genomes Compact genome of the Antarctic midge is likely an adaptation to an extreme environment Transcriptomic Analysis of C. elegans RNA Sequencing Data Through the Tuxedo Suite on the Galaxy Project.Evaluating de Bruijn graph assemblers on 454 transcriptomic data Efficient RNA isoform identification and quantification from RNA-Seq data with network flows.AGOUTI: improving genome assembly and annotation using transcriptome data.Integrating transcriptomic and proteomic data for accurate assembly and annotation of genomes.The genome and developmental transcriptome of the strongylid nematode Haemonchus contortus Sequencing, assembling, and correcting draft genomes using recombinant populations Generation of physical map contig-specific sequences WormBase 2012: more genomes, more data, new website.Microbial genomic analysis reveals the essential role of inflammation in bacteria-induced colorectal cancer.Improved structural annotation of protein-coding genes in the Meloidogyne hapla genome using RNA-Seq.Assessment of transcript reconstruction methods for RNA-seq.Transcriptome deep-sequencing and clustering of expressed isoforms from Favia corals GO-Module: functional synthesis and improved interpretation of Gene Ontology patterns BESST--efficient scaffolding of large fragmented assemblies.Full-length enriched cDNA libraries and ORFeome analysis of sugarcane hybrid and ancestor genotypes Signature gene expression reveals novel clues to the molecular mechanisms of dimorphic transition in Penicillium marneffei.Extensive error in the number of genes inferred from draft genome assemblies.Draft genome of Brugia pahangi: high similarity between B. pahangi and B. malayi Reproductive Mode and the Evolution of Genome Size and Structure in Caenorhabditis Nematodes.Lucilia cuprina genome unlocks parasitic fly biology to underpin future interventions.Hc-daf-2 encodes an insulin-like receptor kinase in the barber's pole worm, Haemonchus contortus, and restores partial dauer regulation.Comparative genomics of Steinernema reveals deeply conserved gene regulatory networks.Next generation sequencing in clinical medicine: Challenges and lessons for pathology and biomedical informatics.Origin and evolution of dishevelled.Incorporating genomics into the toolkit of nematology.A Microbial Metagenome (Leucobacter sp.) in Caenorhabditis Whole Genome Sequences.The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle WormBase: Annotating many nematode genomes

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P2860

Scaffolding a Caenorhabditis nematode genome with RNA-seq

http://www.wikidata.org/entity/Q22065770

description

2010 nî lūn-bûn

@nan

2010 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2010 թվականի դեկտեմբերին հրատարակված գիտական հոդված

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2010年の論文

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2010年論文

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2010年論文

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2010年論文

@zh-hk

2010年論文

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2010年論文

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2010年论文

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name

Scaffolding a Caenorhabditis nematode genome with RNA-seq

@ast

Scaffolding a Caenorhabditis nematode genome with RNA-seq

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Scaffolding a Caenorhabditis nematode genome with RNA-seq

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Scaffolding a Caenorhabditis nematode genome with RNA-seq

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type

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Scaffolding a Caenorhabditis nematode genome with RNA-seq

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Scaffolding a Caenorhabditis nematode genome with RNA-seq

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Scaffolding a Caenorhabditis nematode genome with RNA-seq

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Scaffolding a Caenorhabditis nematode genome with RNA-seq

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prefLabel

Scaffolding a Caenorhabditis nematode genome with RNA-seq

@ast

Scaffolding a Caenorhabditis nematode genome with RNA-seq

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Scaffolding a Caenorhabditis nematode genome with RNA-seq

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Scaffolding a Caenorhabditis nematode genome with RNA-seq

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Genome Research

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Scaffolding a Caenorhabditis nematode genome with RNA-seq

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Ali Mortazavi

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Barbara J Wold

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Brian Williams

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Igor Antoshechkin

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Lorian Schaeffer

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P2860

The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Draft genome of the filarial nematode parasite Brugia malayi

Sequence and genetic map of Meloidogyne hapla: A compact nematode genome for plant parasitism

Mapping and quantifying mammalian transcriptomes by RNA-Seq

The Pristionchus pacificus genome provides a unique perspective on nematode lifestyle and parasitism

Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita

Finishing the euchromatic sequence of the human genome

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes.

TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes

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1740-7

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49601

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10.1101/GR.111021.110

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12

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20

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Erich M Schwarz

Paul W. Sternberg

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2010-12-01T00:00:00Z

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47566545

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20980554

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2990000

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