YASS: enhancing the sensitivity of DNA similarity search - Test2 - elhamkhani - TriplyDB

YASS: enhancing the sensitivity of DNA similarity search

YASS: enhancing the sensitivity of DNA similarity search

http://www.wikidata.org/entity/Q24530540

about

A gene expression restriction network mediated by sense and antisense Alu sequences located on protein-coding messenger RNAs Designing Efficient Spaced Seeds for SOLiD Read Mapping The genome sequence of the model ascomycete fungus Podospora anserina Sex determination in the first-described sexual fungus Exaptation of Bornavirus-Like Nucleoprotein Elements in Afrotherians Mammalian small nucleolar RNAs are mobile genetic elements A Portrait of Ribosomal DNA Contacts with Hi-C Reveals 5S and 45S rDNA Anchoring Points in the Folded Human Genome RNA at 92 °C: the non-coding transcriptome of the hyperthermophilic archaeon Pyrococcus abyssi Dancing together and separate again: gymnosperms exhibit frequent changes of fundamental 5S and 35S rRNA gene (rDNA) organisation Homoplastic microinversions and the avian tree of life The mitochondrial genome of the egg-laying flatworm Aglaiogyrodactylus forficulatus (Platyhelminthes: Monogenoidea)IncA/C Conjugative Plasmids Mobilize a New Family of Multidrug Resistance Islands in Clinical Vibrio cholerae Non-O1/Non-O139 Isolates from Haiti Seeds for effective oligonucleotide design A bioinformatician's guide to the forefront of suffix array construction algorithms Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies.An empirical study of choosing efficient discriminative seeds for oligonucleotide design DHX9 suppresses RNA processing defects originating from the Alu invasion of the human genome.Optimal neighborhood indexing for protein similarity search Hit integration for identifying optimal spaced seeds Sequence analysis of two alleles reveals that intra-and intergenic recombination played a role in the evolution of the radish fertility restorer (Rfo).A scenario of mitochondrial genome evolution in maize based on rearrangement events.Ablation of RNA interference and retrotransposons accompany acquisition and evolution of transposases to heterochromatin protein CENPB.Higher-order organisation of extremely amplified, potentially functional and massively methylated 5S rDNA in European pikes (Esox sp.).Comprehensive prediction of chromosome dimer resolution sites in bacterial genomes.Wild tobacco genomes reveal the evolution of nicotine biosynthesis.Detection of small RNAs in Bordetella pertussis and identification of a novel repeated genetic element.Uncovering the prevalence and diversity of integrating conjugative elements in actinobacteria.Efficient computation of spaced seeds The human gut virome: inter-individual variation and dynamic response to diet.Detecting long tandem duplications in genomic sequences.Draft genome of a commonly misdiagnosed multidrug resistant pathogen Candida auris Discovery and profiling of small RNAs responsive to stress conditions in the plant pathogen Pectobacterium atrosepticum Arabidopsis thaliana resistance to fusarium oxysporum 2 implicates tyrosine-sulfated peptide signaling in susceptibility and resistance to root infection.The Rsm regulon of plant growth-promoting Pseudomonas fluorescens SS101: role of small RNAs in regulation of lipopeptide biosynthesis An alternative approach to multiple genome comparison.Structural and content diversity of mitochondrial genome in beet: a comparative genomic analysis YOC, A new strategy for pairwise alignment of collinear genomes.Ortholog alleles at Xa3/Xa26 locus confer conserved race-specific resistance against Xanthomonas oryzae in rice.ALP & FALP: C++ libraries for pairwise local alignment E-values Mitochondrial Genome Analysis of Wild Rice (Oryza minuta) and Its Comparison with Other Related Species

P2860

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P2860

YASS: enhancing the sensitivity of DNA similarity search

http://www.wikidata.org/entity/Q24530540

description

2005 nî lūn-bûn

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2005 թուականի Յուլիսին հրատարակուած գիտական յօդուած

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2005年の論文

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YASS: enhancing the sensitivity of DNA similarity search

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YASS: enhancing the sensitivity of DNA similarity search

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YASS: enhancing the sensitivity of DNA similarity search

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YASS: enhancing the sensitivity of DNA similarity search

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YASS: enhancing the sensitivity of DNA similarity search

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Nucleic Acids Research

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YASS: enhancing the sensitivity of DNA similarity search

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P2860

Improved hit criteria for DNA local alignment

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

Human-mouse alignments with BLASTZ

Improved tools for biological sequence comparison.

Basic local alignment search tool

Identification of common molecular subsequences

Tandem repeats finder: a program to analyze DNA sequences

PatternHunter: faster and more sensitive homology search

Patternhunter II: highly sensitive and fast homology search

A unifying framework for seed sensitivity and its application to subset seeds.

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scholarly article

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1592765

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10.1093/NAR/GKI478

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Web Server issue

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33

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Gregory Kucherov

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2005-07-01T00:00:00Z

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15980530

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