A conserved pseudouridine modification in eukaryotic U2 snRNA induces a change in branch-site architecture - Test2 - elhamkhani - TriplyDB

A conserved pseudouridine modification in eukaryotic U2 snRNA induces a change in branch-site architecture

A conserved pseudouridine modification in eukaryotic U2 snRNA induces a change in branch-site architecture

http://www.wikidata.org/entity/Q24540031

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Trypanosome spliced-leader-associated RNA (SLA1) localization and implications for spliced-leader RNA biogenesis Recognition of the spliceosomal branch site RNA helix on the basis of surface and electrostatic features Pseudouridine modification in Caenorhabditis elegans spliceosomal snRNAs: unique modifications are found in regions involved in snRNA-snRNA interactions Post-transcriptional nucleotide modification and alternative folding of RNA Pseudouridines in spliceosomal snRNAs The structure of the human tRNALys3 anticodon bound to the HIV genome is stabilized by modified nucleosides and adjacent mismatch base pairs Effect of pseudouridylation on the structure and activity of the catalytically essential P6.1 hairpin in human telomerase RNA The tRNA recognition mechanism of the minimalist SPOUT methyltransferase, TrmL Role of helical constraints of the EBS1-IBS1 duplex of a group II intron on demarcation of the 5' splice site Structure modulation of helix 69 from Escherichia coli 23S ribosomal RNA by pseudouridylations Pseudouridylation (Psi) of U2 snRNA in S. cerevisiae is catalyzed by an RNA-independent mechanism.Different mechanisms for pseudouridine formation in yeast 5S and 5.8S rRNAs.The Saccharomyces cerevisiae U2 snRNA:pseudouridine-synthase Pus7p is a novel multisite-multisubstrate RNA:Psi-synthase also acting on tRNAs.Mitochondrial myopathy and sideroblastic anemia (MLASA): missense mutation in the pseudouridine synthase 1 (PUS1) gene is associated with the loss of tRNA pseudouridylation Pseudouridine synthase 1: a site-specific synthase without strict sequence recognition requirements Impact of base pair identity 5' to the spliceosomal branch site adenosine on branch site conformation tRNA biology charges to the front Investigation of Overhauser effects between pseudouridine and water protons in RNA helices.NMR spectroscopy of RNA duplexes containing pseudouridine in supercooled water.Combined experimental and computational approach to identify non-protein-coding RNAs in the deep-branching eukaryote Giardia intestinalis The Schizosaccharomyces pombe mgU6-47 gene is required for 2'-O-methylation of U6 snRNA at A41.Spliceosomal snRNA modifications and their function.RNA modifications: a mechanism that modulates gene expression.An H/ACA guide RNA directs U2 pseudouridylation at two different sites in the branchpoint recognition region in Xenopus oocytes.Pseudouridines in and near the branch site recognition region of U2 snRNA are required for snRNP biogenesis and pre-mRNA splicing in Xenopus oocytes Effects of nucleotide substitution and modification on the stability and structure of helix 69 from 28S rRNA Modifications to toxic CUG RNAs induce structural stability, rescue mis-splicing in a myotonic dystrophy cell model and reduce toxicity in a myotonic dystrophy zebrafish model.Insight into the mechanisms and functions of spliceosomal snRNA pseudouridylation.RNA-guided nucleotide modification of ribosomal and other RNAs.The many facets of H/ACA ribonucleoproteins A counterintuitive Mg2+-dependent and modification-assisted functional folding of mitochondrial tRNAs Pseudouridine: still mysterious, but never a fake (uridine)!Pseudouridines in U2 snRNA stimulate the ATPase activity of Prp5 during spliceosome assembly RNA pseudouridylation: new insights into an old modification Unveiling substrate RNA binding to H/ACA RNPs: one side fits all.Expanding the nucleotide repertoire of the ribosome with post-transcriptional modifications.Conformational heterogeneity of the protein-free human spliceosomal U2-U6 snRNA complex Do all modifications benefit all tRNAs?The contribution of pseudouridine to stabilities and structure of RNAs.mRNA pseudouridylation affects RNA metabolism in the parasite Toxoplasma gondii.

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P2860

A conserved pseudouridine modification in eukaryotic U2 snRNA induces a change in branch-site architecture

http://www.wikidata.org/entity/Q24540031

description

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P2860

Structure of tau exon 10 splicing regulatory element RNA and destabilization by mutations of frontotemporal dementia and parkinsonism linked to chromosome 17

The structural basis for tRNA recognition and pseudouridine formation by pseudouridine synthase I

Solution conformation of a bulged adenosine base in an RNA duplex by relaxation matrix refinement

Proton NMR and structural features of a 24-nucleotide RNA hairpin

Solution structure of the donor site of a trans-splicing RNA

Crystal structures of an A-form duplex with single-adenosine bulges and a conformational basis for site-specific RNA self-cleavage

Solution structure of a metal-binding site in the major groove of RNA complexed with cobalt (III) hexammine

NMR structure and dynamics of an RNA motif common to the spliceosome branch-point helix and the RNA-binding site for phage GA coat protein

Stabilization of the anticodon stem-loop of tRNALys,3 by an A+-C base-pair and by pseudouridine

Pseudouridine mapping in the Saccharomyces cerevisiae spliceosomal U small nuclear RNAs (snRNAs) reveals that pseudouridine synthase pus1p exhibits a dual substrate specificity for U2 snRNA and tRNA.

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