Conformational flexibility in RNA: the role of dihydrouridine - Test2 - elhamkhani - TriplyDB

Conformational flexibility in RNA: the role of dihydrouridine

Conformational flexibility in RNA: the role of dihydrouridine

http://www.wikidata.org/entity/Q24546139

about

A conserved family of Saccharomyces cerevisiae synthases effects dihydrouridine modification of tRNA Mechanism of dihydrouridine synthase 2 from yeast and the importance of modifications for efficient tRNA reduction Posttranscriptional modification of tRNA in psychrophilic bacteria Trying on tRNA for Size: RNase P and the T-box Riboswitch as Molecular Rulers Molecular basis of dihydrouridine formation on tRNA Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA Structure of dihydrouridine synthase C (DusC) fromEscherichia coli Contribution of dihydrouridine in folding of the D-arm in tRNA The specificities of four yeast dihydrouridine synthases for cytoplasmic tRNAs.Controlling translation via modulation of tRNA levels Strategies for RNA folding and assembly 3-(3-amino-3-carboxypropyl)-5,6-dihydrouridine is one of two novel post-transcriptional modifications in tRNALys(UUU) from Trypanosoma brucei.Molecular evolution of dihydrouridine synthases.Mutagenesis of the peptidyltransferase center of 23S rRNA: the invariant U2449 is dispensable.Prediction of uridine modifications in tRNA sequences tRNA modifications regulate translation during cellular stress.High-resolution structure of the Escherichia coli ribosome.Major reorientation of tRNA substrates defines specificity of dihydrouridine synthases.Structure and mechanism of the T-box riboswitches.Mitochondrial transcript maturation and its disorders Influence of temperature on tRNA modification in archaea: Methanococcoides burtonii (optimum growth temperature [Topt], 23 degrees C) and Stetteria hydrogenophila (Topt, 95 degrees C).An extended dsRBD is required for post-transcriptional modification in human tRNAs.A Platform for Discovery and Quantification of Modified Ribonucleosides in RNA: Application to Stress-Induced Reprogramming of tRNA Modifications.Evaluating the reproducibility of quantifying modified nucleosides from ribonucleic acids by LC-UV-MS.Proteus mirabilis genes that contribute to pathogenesis of urinary tract infection: identification of 25 signature-tagged mutants attenuated at least 100-fold.Do all modifications benefit all tRNAs?Nuclear-encoded factors involved in post-transcriptional processing and modification of mitochondrial tRNAs in human disease.From bacterial to human dihydrouridine synthase: automated structure determination.Structural landscape of base pairs containing post-transcriptional modifications in RNA.Chemical and Conformational Diversity of Modified Nucleosides Affects tRNA Structure and Function tRNA Modifications: Impact on Structure and Thermal Adaptation.Additive CHARMM force field for naturally occurring modified ribonucleotides.tRNA base methylation identification and quantification via high-throughput sequencing.Quantitative measurement of dihydrouridine in RNA using isotope dilution liquid chromatography-mass spectrometry (LC/MS).Correlation between the stability of tRNA tertiary structure and the catalytic efficiency of a tRNA-modifying enzyme, archaeal tRNA-guanine transglycosylase.Structural effects of modified ribonucleotides and magnesium in transfer RNAs.An atlas of RNA base pairs involving modified nucleobases with optimal geometries and accurate energies.The role of RNA conformation in RNA-protein recognition.Structural signatures of antibiotic binding sites on the ribosome.Conformational readout of RNA by small ligands

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P2860

Conformational flexibility in RNA: the role of dihydrouridine

http://www.wikidata.org/entity/Q24546139

description

1996 nî lūn-bûn

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1996 թվականի մարտին հրատարակված գիտական հոդված

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1996年の論文

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Conformational flexibility in RNA: the role of dihydrouridine

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Conformational flexibility in RNA: the role of dihydrouridine

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Conformational flexibility in RNA: the role of dihydrouridine

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Conformational flexibility in RNA: the role of dihydrouridine

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Conformational flexibility in RNA: the role of dihydrouridine

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Conformational flexibility in RNA: the role of dihydrouridine

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Conformational flexibility in RNA: the role of dihydrouridine

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Conformational flexibility in RNA: the role of dihydrouridine

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Conformational flexibility in RNA: the role of dihydrouridine

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Nucleic Acids Research

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Conformational flexibility in RNA: the role of dihydrouridine

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A E Sopchik

http://www.w3.org/2001/XMLSchema#string

D R Davis

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J A McCloskey

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J J Dalluge

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T Hashizume

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P2860

Restrained refinement of the monoclinic form of yeast phenylalanine transfer RNA. Temperature factors and dynamics, coordinated waters, and base-pair propeller twist angles

The role of posttranscriptional modification in stabilization of transfer RNA from hyperthermophiles.

Summary: the modified nucleosides of RNA.

Structural domains of transfer RNA molecules.

Dynamic structures and functions of transfer ribonucleic acids from extreme thermophiles.

Transfer RNA modification.

Synthesis and hybridization studies on two complementary nona(2'-O-methyl)ribonucleotides.

Stabilization of RNA stacking by pseudouridine

Compilation of tRNA sequences and sequences of tRNA genes.

On the conformation of 5-substituted uridines as studied by proton magnetic resonance.

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1073-9

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scholarly article

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4938346

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10.1093/NAR/24.6.1073

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6

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24

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8604341

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145759

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