Protein-ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment
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Proteins and Their Interacting Partners: An Introduction to Protein-Ligand Binding Site Prediction MethodsModeling enzyme-ligand binding in drug discoveryMolecular dynamic simulations reveal the structural determinants of Fatty Acid binding to oxy-myoglobinbSiteFinder, an improved protein-binding sites prediction server based on structural alignment: more accurate and less time-consumingPurification of Zika virus RNA-dependent RNA polymerase and its use to identify small-molecule Zika inhibitorsA new supervised over-sampling algorithm with application to protein-nucleotide binding residue predictionPINGU: PredIction of eNzyme catalytic residues usinG seqUence informationPredicting Ligand Binding Sites on Protein Surfaces by 3-Dimensional Probability Density Distributions of Interacting AtomsComputational Analysis of the Ligand Binding Site of the Extracellular ATP Receptor, DORN1Automatic generation of bioinformatics tools for predicting protein-ligand binding sitesA novel approach using C. elegans DNA damage-induced apoptosis to characterize the dynamics of uptake transporters for therapeutic drug discoveriesProtein ligand-specific binding residue predictions by an ensemble classifierMutation-Structure-Function Relationship Based Integrated Strategy Reveals the Potential Impact of Deleterious Missense Mutations in Autophagy Related Proteins on Hepatocellular Carcinoma (HCC): A Comprehensive Informatics ApproachProBiS-ligands: a web server for prediction of ligands by examination of protein binding sites.The structure and dynamics of BmR1 protein from Brugia malayi: in silico approachesLead discovery and in silico 3D structure modeling of tumorigenic FAM72A (p17).The I-TASSER Suite: protein structure and function prediction.I-TASSER server: new development for protein structure and function predictionsStructure prediction and docking-based molecular insights of human YB-1 and nucleic acid interaction.Protein Structure and Function Prediction Using I-TASSERConnecting common genetic polymorphisms to protein function: A modular project sequence for lecture or lab.3D Structure, Dimerization Modeling, and Lead Discovery by Ligand-protein Interaction Analysis of p60 Transcription Regulator Protein (p60TRP).Molecular and Structural Characterization of the Tegumental 20.6-kDa Protein in Clonorchis sinensis as a Potential Druggable Target.Characterization of Dye-decolorizing Peroxidase (DyP) from Thermomonospora curvata Reveals Unique Catalytic Properties of A-type DyPs.Methylotrophic methanogenesis discovered in the archaeal phylum Verstraetearchaeota.Purification, Biochemical Characterization, and Amino Acid Sequence of a Novel Type of Lectin from Aplysia dactylomela Eggs with Antibacterial/Antibiofilm Potential.In Silico Identification of Mimicking Molecules as Defense Inducers Triggering Jasmonic Acid Mediated Immunity against Alternaria Blight Disease in Brassica Species.Trichoderma virens β-glucosidase I (BGLI) gene; expression in Saccharomyces cerevisiae including docking and molecular dynamics studies.GalaxySite: ligand-binding-site prediction by using molecular docking.NLRP7 inter-domain interactions: the NACHT-associated domain is the physical mediator for oligomeric assemblyIdentification of 9α-hydroxy-17-oxo-1,2,3,4,10,19-hexanorandrostan-5-oic acid in steroid degradation by Comamonas testosteroni TA441 and its conversion to the corresponding 6-en-5-oyl coenzyme A (CoA) involving open reading frame 28 (ORF28)- and ORFUnique attributes of cyanobacterial metabolism revealed by improved genome-scale metabolic modeling and essential gene analysis.Large-scale binding ligand prediction by improved patch-based method Patch-Surfer2.0.Pharmacoinformatics approach for investigation of alternative potential hepatitis C virus nonstructural protein 5B inhibitors.Predicting flavin and nicotinamide adenine dinucleotide-binding sites in proteins using the fragment transformation method.A Molecular-Level Landscape of Diet-Gut Microbiome Interactions: Toward Dietary Interventions Targeting Bacterial GenesIn silico characterization and Molecular modeling of double-strand break repair protein MRE11 from Phoenix dactylifera v deglet nour.Multiple target drug cocktail design for attacking the core network markers of four cancers using ligand-based and structure-based virtual screening methods.A cure for the blues: opsin duplication and subfunctionalization for short-wavelength sensitivity in jewel beetles (Coleoptera: Buprestidae).Recognizing metal and acid radical ion-binding sites by integrating ab initio modeling with template-based transferals.
P2860
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P2860
Protein-ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment
description
2013 nî lūn-bûn
@nan
2013 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2013 թվականի հոտեմբերին հրատարակված գիտական հոդված
@hy
2013年の論文
@ja
2013年論文
@yue
2013年論文
@zh-hant
2013年論文
@zh-hk
2013年論文
@zh-mo
2013年論文
@zh-tw
2013年论文
@wuu
name
Protein-ligand binding site re ...... and sequence profile alignment
@ast
Protein-ligand binding site re ...... and sequence profile alignment
@en
Protein-ligand binding site re ...... and sequence profile alignment
@nl
type
label
Protein-ligand binding site re ...... and sequence profile alignment
@ast
Protein-ligand binding site re ...... and sequence profile alignment
@en
Protein-ligand binding site re ...... and sequence profile alignment
@nl
prefLabel
Protein-ligand binding site re ...... and sequence profile alignment
@ast
Protein-ligand binding site re ...... and sequence profile alignment
@en
Protein-ligand binding site re ...... and sequence profile alignment
@nl
P2860
P3181
P356
P1433
P1476
Protein-ligand binding site re ...... and sequence profile alignment
@en
P2093
Ambrish Roy
Yang Zhang
P2860
P304
P3181
P356
10.1093/BIOINFORMATICS/BTT447
P407
P50
P577
2013-10-15T00:00:00Z