Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG - Test2 - elhamkhani - TriplyDB

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

http://www.wikidata.org/entity/Q24615828

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Metabolic reconstruction for metagenomic data and its application to the human microbiome The human microbiome: our second genome Application of computational methods in genetic study of inflammatory bowel disease Computational meta'omics for microbial community studies RNA-seq-based metatranscriptomic and microscopic investigation reveals novel metalloproteases of Neobodo sp. as potential virulence factors for soft tunic syndrome in Halocynthia roretzi Pathogens and host immunity in the ancient human oral cavity The structure of microbial community and degradation of diatoms in the deep near-bottom layer of Lake Baikal Global transcriptome analysis of the scorpion Centruroides noxius: new toxin families and evolutionary insights from an ancestral scorpion species SUPER-FOCUS: a tool for agile functional analysis of shotgun metagenomic data Effect of experimental soil disturbance and recovery on structure and function of soil community: a metagenomic and metagenetic approach Exploring neighborhoods in the metagenome universe Handling temperature bursts reaching 464°C: different microbial strategies in the sisters peak hydrothermal chimney.Statistical approach of functional profiling for a microbial community.Experimental and analytical tools for studying the human microbiome.Generation and analysis of a mouse intestinal metatranscriptome through Illumina based RNA-sequencing.Genome sequencing and genomic characterization of a tigecycline-resistant Klebsiella pneumoniae strain isolated from the bile samples of a cholangiocarcinoma patient Rapid phylogenetic and functional classification of short genomic fragments with signature peptides Current opportunities and challenges in microbial metagenome analysis--a bioinformatic perspective Characterization of the Gut Microbiome Using 16S or Shotgun Metagenomics Comparison of assembly algorithms for improving rate of metatranscriptomic functional annotation Micro-scale determinants of bacterial diversity in soil.A metagenomics transect into the deepest point of the Baltic Sea reveals clear stratification of microbial functional capacities Integrated metagenomic and metatranscriptomic analyses of microbial communities in the meso- and bathypelagic realm of north pacific ocean.Whole genome sequence and comparative genomic analysis of multidrug-resistant Staphylococcus capitis subsp. urealyticus strain LNZR-1.Metagenome of a microbial community inhabiting a metal-rich tropical stream sediment.Metatranscriptomic analysis of arctic peat soil microbiota.Dissecting microbial community structure and methane-producing pathways of a full-scale anaerobic reactor digesting activated sludge from wastewater treatment by metagenomic sequencing.The human mycobiome Elviz - exploration of metagenome assemblies with an interactive visualization tool.In silico analyses of metagenomes from human atherosclerotic plaque samples.Evaluation of shotgun metagenomics sequence classification methods using in silico and in vitro simulated communities.Metatranscriptomic analysis of diverse microbial communities reveals core metabolic pathways and microbiome-specific functionality.Measuring the microbiome: perspectives on advances in DNA-based techniques for exploring microbial life An Agile Functional Analysis of Metagenomic Data Using SUPER-FOCUS.Selecting age-related functional characteristics in the human gut microbiome.Differences in Gut Metabolites and Microbial Composition and Functions between Egyptian and U.S. Children Are Consistent with Their Diets.Next-generation sequencing approaches to understanding the oral microbiome.Bioprospecting of functional cellulases from metagenome for second generation biofuel production: a review.Methylotrophic methanogenic Thermoplasmata implicated in reduced methane emissions from bovine rumen.Metatranscriptomics Reveals the Functions and Enzyme Profiles of the Microbial Community in Chinese Nong-Flavor Liquor Starter.

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Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

http://www.wikidata.org/entity/Q24615828

description

2011 nî lūn-bûn

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2011 թուականին հրատարակուած գիտական յօդուած

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2011 թվականին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年论文

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name

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

@ast

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

@en

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

@nl

type

label

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

@ast

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

@en

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

@nl

prefLabel

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

@ast

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

@en

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

@nl

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1471-2105-12-S1-S21

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BMC Bioinformatics

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Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

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Andreas Wilke

http://www.w3.org/2001/XMLSchema#string

Daniel C Richter

http://www.w3.org/2001/XMLSchema#string

Daniel H Huson

http://www.w3.org/2001/XMLSchema#string

Jack A Gilbert

http://www.w3.org/2001/XMLSchema#string

Paul Rupek

http://www.w3.org/2001/XMLSchema#string

Suparna Mitra

http://www.w3.org/2001/XMLSchema#string

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CAMERA: a community resource for metagenomics

The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes

KEGG: kyoto encyclopedia of genes and genomes

MEGAN analysis of metagenomic data

TETRA: a web-service and a stand-alone program for the analysis and comparison of tetranucleotide usage patterns in DNA sequences

The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes

The integrated microbial genomes (IMG) system

Basic local alignment search tool

Phylogenetic classification of short environmental DNA fragments

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1471-2105-12-s1-s21

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S21

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scholarly article

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2194060

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10.1186/1471-2105-12-S1-S21

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P433

Suppl 1

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12 Suppl 1

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12

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2011-01-01T00:00:00Z

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1010663373

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21342551

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P921

Kyoto Encyclopedia of Genes and Genomes

P932

3044276

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