YeTFaSCo: a database of evaluated yeast transcription factor sequence specificities - Test2 - elhamkhani - TriplyDB

YeTFaSCo: a database of evaluated yeast transcription factor sequence specificities

YeTFaSCo: a database of evaluated yeast transcription factor sequence specificities

http://www.wikidata.org/entity/Q24623237

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Defining the Essential Function of Yeast Hsf1 Reveals a Compact Transcriptional Program for Maintaining Eukaryotic Proteostasis.Genome-Wide Mapping of Binding Sites Reveals Multiple Biological Functions of the Transcription Factor Cst6p in Saccharomyces cerevisiae Saccharomyces genome database provides new regulation data.Evolution of reduced co-activator dependence led to target expansion of a starvation response pathway.Genome urbanization: clusters of topologically co-regulated genes delineate functional compartments in the genome of Saccharomyces cerevisiae.DNA motif elucidation using belief propagation.One Hand Clapping: detection of condition-specific transcription factor interactions from genome-wide gene activity data.A comprehensive functional portrait of two heat shock factor-type transcriptional regulators involved in Candida albicans morphogenesis and virulence iRegulon: from a gene list to a gene regulatory network using large motif and track collections.Determination and inference of eukaryotic transcription factor sequence specificity.An efficient algorithm to explore liquid association on a genome-wide scale.The Chromatin and Transcriptional Landscape of Native Saccharomyces cerevisiae Telomeres and Subtelomeric Domains.i-cisTarget: an integrative genomics method for the prediction of regulatory features and cis-regulatory modules.Functional Analysis of Kinases and Transcription Factors in Saccharomyces cerevisiae Using an Integrated Overexpression Library BEESEM: estimation of binding energy models using HT-SELEX data.Evidence classification of high-throughput protocols and confidence integration in RegulonDB.Combinatorial Cis-regulation in Saccharomyces Species.Comprehensive Analysis of the SUL1 Promoter of Saccharomyces cerevisiae Evaluation of methods for modeling transcription factor sequence specificity.Mapping yeast transcriptional networks Engineering of synthetic, stress-responsive yeast promoters.Nascent RNA sequencing reveals distinct features in plant transcription.Large-scale mapping of gene regulatory logic reveals context-dependent repression by transcriptional activators.TFBSshape: a motif database for DNA shape features of transcription factor binding sites Role of Ectopic Gene Conversion in the Evolution of a Candida krusei Pleiotropic Drug Resistance Transporter Family.The YEASTRACT database: an upgraded information system for the analysis of gene and genomic transcription regulation in Saccharomyces cerevisiae.Natural variation in non-coding regions underlying phenotypic diversity in budding yeast.Invisible cities: segregated domains in the yeast genome with distinct structural and functional attributes.Functional Profiling of Transcription Factor Genes in Neurospora crassa.MotifHyades: Expectation Maximization for de novo DNA Motif Pair Discovery on Paired Sequences.Natural gene expression variation studies in yeast.Evidence for a Strong Correlation Between Transcription Factor Protein Disorder and Organismic Complexity.Signaling domains of mucin Msb2 in Candida albicans.Mapping and analysis of Caenorhabditis elegans transcription factor sequence specificities.Functional Metabolomics Describes the Yeast Biosynthetic Regulome.Cis-Regulatory Divergence in Gene Expression between Two Thermally Divergent Yeast Species.Genetic basis of mycotoxin susceptibility differences between budding yeast isolates.The Gcn4 transcription factor reduces protein synthesis capacity and extends yeast lifespan.P-body proteins regulate transcriptional rewiring to promote DNA replication stress resistance.A unified model for yeast transcript definition.

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P2860

YeTFaSCo: a database of evaluated yeast transcription factor sequence specificities

http://www.wikidata.org/entity/Q24623237

description

2012 nî lūn-bûn

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2012 թուականի Յունուարին հրատարակուած գիտական յօդուած

@hyw

2012 թվականի հունվարին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年论文

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name

YeTFaSCo: a database of evaluated yeast transcription factor sequence specificities

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YeTFaSCo: a database of evaluated yeast transcription factor sequence specificities

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YeTFaSCo: a database of evaluated yeast transcription factor sequence specificities

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YeTFaSCo: a database of evaluated yeast transcription factor sequence specificities

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YeTFaSCo: a database of evaluated yeast transcription factor sequence specificities

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Nucleic Acids Research

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YeTFaSCo: a database of evaluated yeast transcription factor sequence specificities

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Carl G de Boer

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Timothy R Hughes

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Sequencing and comparison of yeast species to identify genes and regulatory elements

Purification of proteins associated with specific genomic Loci

The YEASTRACT database: a tool for the analysis of transcription regulatory associations in Saccharomyces cerevisiae.

TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes

YPA: an integrated repository of promoter features in Saccharomyces cerevisiae

The UCSC Genome Browser database: update 2011

The Pfam protein families database

UniPROBE: an online database of protein binding microarray data on protein-DNA interactions

InterPro: the integrative protein signature database

SMART 6: recent updates and new developments

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10.1093/NAR/GKR993

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40

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