The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments - Test2 - elhamkhani - TriplyDB

The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments

The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments

http://www.wikidata.org/entity/Q24634193

about

Genome-wide annotation and quantitation of translation by ribosome profiling Jellyfish Bioactive Compounds: Methods for Wet-Lab Work Decoding mechanisms by which silent codon changes influence protein biogenesis and function Ribosome profiling: a Hi-Def monitor for protein synthesis at the genome-wide scale Library construction for next-generation sequencing: overviews and challenges.MicroRNAs in the Stressed Heart: Sorting the Signal from the Noise RNA-binding proteins in neurodegeneration: Seq and you shall receive The translational regulators GCN-1 and ABCF-3 act together to promote apoptosis in C. elegans RiboTag analysis of actively translated mRNAs in Sertoli and Leydig cells in vivo.Structure of the hypusinylated eukaryotic translation factor eIF-5A bound to the ribosome Effects of the yeast RNA-binding protein Whi3 on the half-life and abundance of CLN3 mRNA and other targets Integrative analysis of RNA, translation, and protein levels reveals distinct regulatory variation across humans A long noncoding RNA mediates both activation and repression of immune response genes Stem cells. m6A mRNA methylation facilitates resolution of naïve pluripotency toward differentiation Embryonic Stem Cell Growth Factors Regulate eIF2α Phosphorylation Mutations in Nonessential eIF3k and eIF3l Genes Confer Lifespan Extension and Enhanced Resistance to ER Stress in Caenorhabditis elegans Translation of 5' leaders is pervasive in genes resistant to eIF2 repression Cell-fate determination by ubiquitin-dependent regulation of translation The novel lysine specific methyltransferase METTL21B affects mRNA translation through inducible and dynamic methylation of Lys-165 in human eukaryotic elongation factor 1 alpha (eEF1A)High-Resolution Analysis of Coronavirus Gene Expression by RNA Sequencing and Ribosome Profiling.RiboDiff: detecting changes of mRNA translation efficiency from ribosome footprints.Detecting translational regulation by change point analysis of ribosome profiling data sets The use of duplex-specific nuclease in ribosome profiling and a user-friendly software package for Ribo-seq data analysis.Genome-wide assessment of differential translations with ribosome profiling data.Mechanisms of protein balance in skeletal muscle.Consistent global structures of complex RNA states through multidimensional chemical mapping.Quantifying absolute protein synthesis rates reveals principles underlying allocation of cellular resources Re-annotation of the Saccharopolyspora erythraea genome using a systems biology approach Asc1, Hel2, and Slh1 couple translation arrest to nascent chain degradation.The Human CCHC-type Zinc Finger Nucleic Acid-Binding Protein Binds G-Rich Elements in Target mRNA Coding Sequences and Promotes Translation.RNA-seq reveals determinants of sensitivity to chemotherapy drugs in esophageal carcinoma cells.N-terminal proteomics and ribosome profiling provide a comprehensive view of the alternative translation initiation landscape in mice and men Global analysis of gene expression reveals mRNA superinduction is required for the inducible immune response to a bacterial pathogen.Slowed decay of mRNAs enhances platelet specific translation The centrality of RNA for engineering gene expression Natural antisense transcripts are significantly involved in regulation of drought stress in maize.Selective and flexible depletion of problematic sequences from RNA-seq libraries at the cDNA stage.Distinct stages of the translation elongation cycle revealed by sequencing ribosome-protected mRNA fragments.Ribosome RNA Profiling to Quantify Ovarian Development and Identify Sex in Fish.Translation Initiation from Conserved Non-AUG Codons Provides Additional Layers of Regulation and Coding Capacity.

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The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments

http://www.wikidata.org/entity/Q24634193

description

2012 nî lūn-bûn

@nan

2012 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

@hyw

2012 թվականի օգոստոսին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年论文

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The ribosome profiling strateg ...... osome-protected mRNA fragments

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The ribosome profiling strateg ...... osome-protected mRNA fragments

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The ribosome profiling strateg ...... osome-protected mRNA fragments

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The ribosome profiling strateg ...... osome-protected mRNA fragments

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The ribosome profiling strateg ...... osome-protected mRNA fragments

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The ribosome profiling strateg ...... osome-protected mRNA fragments

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The ribosome profiling strateg ...... osome-protected mRNA fragments

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The ribosome profiling strateg ...... osome-protected mRNA fragments

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The ribosome profiling strateg ...... osome-protected mRNA fragments

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Nature Protocols

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The ribosome profiling strateg ...... osome-protected mRNA fragments

@en

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Anna M McGeachy

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Gloria A Brar

http://www.w3.org/2001/XMLSchema#string

Nicholas T Ingolia

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Silvia Rouskin

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Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Differential expression analysis for sequence count data

Differentiating protein-coding and noncoding RNA: challenges and ambiguities

Mapping and quantifying mammalian transcriptomes by RNA-Seq

Biases in Illumina transcriptome sequencing caused by random hexamer priming

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

The transcriptional landscape of the yeast genome defined by RNA sequencing

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

Accurate whole human genome sequencing using reversible terminator chemistry

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1534-50

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scholarly article

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248269

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10.1038/NPROT.2012.086

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8

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7

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Jonathan Weissman

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2012-08-01T00:00:00Z

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1010450110

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22836135

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3535016

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