BACTIBASE second release: a database and tool platform for bacteriocin characterization - Test2 - elhamkhani - TriplyDB

BACTIBASE second release: a database and tool platform for bacteriocin characterization

BACTIBASE second release: a database and tool platform for bacteriocin characterization

http://www.wikidata.org/entity/Q24645542

about

A large-scale structural classification of antimicrobial peptides Class IIa bacteriocins: diversity and new developments Prediction of antimicrobial peptides based on sequence alignment and feature selection methods Identification, purification and characterization of laterosporulin, a novel bacteriocin produced by Brevibacillus sp. strain GI-9 LAMP: A Database Linking Antimicrobial Peptides Draft Genome Sequence of Enterococcus faecium Strain 58m, Isolated from Intestinal Tract Content of a Woolly Mammoth, Mammuthus primigenius CAMP: Collection of sequences and structures of antimicrobial peptides DRAMP: a comprehensive data repository of antimicrobial peptides.Prediction of linear cationic antimicrobial peptides based on characteristics responsible for their interaction with the membranes In silico analysis highlights the frequency and diversity of type 1 lantibiotic gene clusters in genome sequenced bacteria.Emerging strategies and integrated systems microbiology technologies for biodiscovery of marine bioactive compounds.EnzyBase: a novel database for enzybiotic studies.Genomic analyses of pneumococci reveal a wide diversity of bacteriocins - including pneumocyclicin, a novel circular bacteriocin.Complete genome sequence of Bifidobacterium longum subsp. longum BBMN68, a new strain from a healthy chinese centenarian A non-pediocin low molecular weight antimicrobial peptide produced by Pediococcus pentosaceus strain IE-3 shows increased activity under reducing environment.Genome mining for ribosomally synthesized and post-translationally modified peptides (RiPPs) in anaerobic bacteria.Common occurrence of antibacterial agents in human intestinal microbiota Anti-proliferative effect on a colon adenocarcinoma cell line exerted by a membrane disrupting antimicrobial peptide KL15.Current status and prospects of computational resources for natural product dereplication: a review.Genomic Features and Niche-Adaptation of Enterococcus faecium Strains from Korean Soybean-Fermented Foods.Antimicrobial potential of bacteriocins in poultry and swine production.CAMPR3: a database on sequences, structures and signatures of antimicrobial peptides.Database-Guided Discovery of Potent Peptides to Combat HIV-1 or Superbugs Increasing the success rate of lantibiotic drug discovery by Synthetic Biology.New trends in peptide-based anti-biofilm strategies: a review of recent achievements and bioinformatic approaches.Anti-infective properties of bacteriocins: an update.Advances in the arsenal of tools available enabling the discovery of novel lantibiotics with therapeutic potential.Bacteriocins: Recent Trends and Potential Applications.Transcription analysis of a lantibiotic gene cluster from Bifidobacterium longum DJO10A Antimicrobial peptides: an alternative for innovative medicines?Current Status and Future Prospects of Marine Natural Products (MNPs) as Antimicrobials.Computational resources and tools for antimicrobial peptides.Bacteriocins: Not Only Antibacterial Agents.Draft Genome Sequence of the Nonstarter Bacteriocin-Producing Strain Enterococcus mundtii CRL35.The sil Locus in Streptococcus Anginosus Group: Interspecies Competition and a Hotspot of Genetic Diversity.SATPdb: a database of structurally annotated therapeutic peptides Overlap and diversity in antimicrobial peptide databases: compiling a non-redundant set of sequences.RiPPMiner: a bioinformatics resource for deciphering chemical structures of RiPPs based on prediction of cleavage and cross-links.In silico analysis of protein toxin and bacteriocins from Lactobacillus paracasei SD1 genome and available online databases BAGEL3: Automated identification of genes encoding bacteriocins and (non-)bactericidal posttranslationally modified peptides.

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P2860

BACTIBASE second release: a database and tool platform for bacteriocin characterization

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2010 nî lūn-bûn

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2010年の論文

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BACTIBASE second release: a database and tool platform for bacteriocin characterization

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BACTIBASE second release: a database and tool platform for bacteriocin characterization

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1471-2180-10-22

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BMC Microbiology

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BACTIBASE second release: a database and tool platform for bacteriocin characterization

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Abdelmajid Zouhir

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Christophe Le Lay

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Ismail Fliss

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Jeannette Ben Hamida

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P2860

BACTIBASE: a new web-accessible database for bacteriocin characterization

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

MUSCLE: multiple sequence alignment with high accuracy and high throughput

CAMP: a useful resource for research on antimicrobial peptides

Improved tools for biological sequence comparison.

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

PhytAMP: a database dedicated to antimicrobial plant peptides

Comparative protein modelling by satisfaction of spatial restraints

T-Coffee: A novel method for fast and accurate multiple sequence alignment

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1051670007

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20105292

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