Global features of sequences of bacterial chromosomes, plasmids and phages revealed by analysis of oligonucleotide usage patterns
about
Differentiation of regions with atypical oligonucleotide composition in bacterial genomes.Evidence of host-virus co-evolution in tetranucleotide usage patterns of bacteriophages and eukaryotic viruses.Pseudomonas aeruginosa Genomic Structure and DiversityComprehensive transcriptome analysis provides new insights into nutritional strategies and phylogenetic relationships of chrysophytesPractical application of self-organizing maps to interrelate biodiversity and functional data in NGS-based metagenomics.Examination of genome homogeneity in prokaryotes using genomic signatures.Structural and functional characterization of three polyketide synthase gene clusters in Bacillus amyloliquefaciens FZB 42.Reliability and applications of statistical methods based on oligonucleotide frequencies in bacterial and archaeal genomes.Investigations of oligonucleotide usage variance within and between prokaryotes.The SeqWord Genome Browser: an online tool for the identification and visualization of atypical regions of bacterial genomes through oligonucleotide usage.Stretches of alternating pyrimidine/purines and purines are respectively linked with pathogenicity and growth temperature in prokaryotesAnalysis of genomic signatures in prokaryotes using multinomial regression and hierarchical clusteringAbundant oligonucleotides common to most bacteria.Diversity of glycosyl hydrolases from cellulose-depleting communities enriched from casts of two earthworm speciesAnalysis of intra-genomic GC content homogeneity within prokaryotes.Genomic comparisons of Brucella spp. and closely related bacteria using base compositional and proteome based methods.Mainstreams of horizontal gene exchange in enterobacteria: consideration of the outbreak of enterohemorrhagic E. coli O104:H4 in Germany in 2011Relative entropy differences in bacterial chromosomes, plasmids, phages and genomic islands.Current opportunities and challenges in microbial metagenome analysis--a bioinformatic perspectiveAmino acid usage is asymmetrically biased in AT- and GC-rich microbial genomes.Diversity of the abundant pKLC102/PAGI-2 family of genomic islands in Pseudomonas aeruginosa.Genome signature analysis of thermal virus metagenomes reveals Archaea and thermophilic signaturesThe genome of Pseudomonas fluorescens strain R124 demonstrates phenotypic adaptation to the mineral environment.Global features of the Alcanivorax borkumensis SK2 genome.A Markovian analysis of bacterial genome sequence constraints.Think big--giant genes in bacteria.SWPhylo - A Novel Tool for Phylogenomic Inferences by Comparison of Oligonucleotide Patterns and Integration of Genome-Based and Gene-Based Phylogenetic Trees.Modeling of the GC content of the substituted bases in bacterial core genomes
P2860
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P2860
Global features of sequences of bacterial chromosomes, plasmids and phages revealed by analysis of oligonucleotide usage patterns
description
2004 nî lūn-bûn
@nan
2004 թուականի Յուլիսին հրատարակուած գիտական յօդուած
@hyw
2004 թվականի հուլիսին հրատարակված գիտական հոդված
@hy
2004年の論文
@ja
2004年論文
@yue
2004年論文
@zh-hant
2004年論文
@zh-hk
2004年論文
@zh-mo
2004年論文
@zh-tw
2004年论文
@wuu
name
Global features of sequences o ...... oligonucleotide usage patterns
@ast
Global features of sequences o ...... oligonucleotide usage patterns
@en
Global features of sequences o ...... oligonucleotide usage patterns
@nl
type
label
Global features of sequences o ...... oligonucleotide usage patterns
@ast
Global features of sequences o ...... oligonucleotide usage patterns
@en
Global features of sequences o ...... oligonucleotide usage patterns
@nl
prefLabel
Global features of sequences o ...... oligonucleotide usage patterns
@ast
Global features of sequences o ...... oligonucleotide usage patterns
@en
Global features of sequences o ...... oligonucleotide usage patterns
@nl
P2860
P356
P1433
P1476
Global features of sequences o ...... oligonucleotide usage patterns
@en
P2093
Burkhard Tümmler
P2860
P2888
P356
10.1186/1471-2105-5-90
P407
P50
P577
2004-07-07T00:00:00Z
P5875
P6179
1035383692