Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry - Test2 - elhamkhani - TriplyDB

Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry

Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry

http://www.wikidata.org/entity/Q24805791

about

From bytes to bedside: data integration and computational biology for translational cancer research AgBase: a functional genomics resource for agriculture Identification of arginine- and lysine-methylation in the proteome of Saccharomyces cerevisiae and its functional implications Genome annotation of Anopheles gambiae using mass spectrometry-derived data.Ensembl 2006.The PeptideAtlas project PepSeeker: a database of proteome peptide identifications for investigating fragmentation patterns Protein identification false discovery rates for very large proteomics data sets generated by tandem mass spectrometry What is mzXML good for?Human SRMAtlas: A Resource of Targeted Assays to Quantify the Complete Human Proteome Introduction to computational proteomics Making proteomics data accessible and reusable: current state of proteomics databases and repositories Proteogenomics: concepts, applications and computational strategies Bioengineering radioresistance by overproduction of RPA, a mammalian-type single-stranded DNA-binding protein, in a halophilic archaeon mz5: space- and time-efficient storage of mass spectrometry data sets PeptideDepot: flexible relational database for visual analysis of quantitative proteomic data and integration of existing protein information Human Proteinpedia: a unified discovery resource for proteomics research Human Proteinpedia as a resource for clinical proteomics Novel gene and gene model detection using a whole genome open reading frame analysis in proteomics.A rapid genome-scale response of the transcriptional oscillator to perturbation reveals a period-doubling path to phenotypic change.The Drosophila melanogaster PeptideAtlas facilitates the use of peptide data for improved fly proteomics and genome annotation.A novel spectral library workflow to enhance protein identifications Interfaces to PeptideAtlas: a case study of standard data access systems.Resilience in the proteomics data ecosystem: how the field cares for its data.Bioinformatic analysis of proteomics data.The need to revisit published data: A concept and framework for complementary proteomics.proBAMsuite, a Bioinformatics Framework for Genome-Based Representation and Analysis of Proteomics Data.2DDB - a bioinformatics solution for analysis of quantitative proteomics data.Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 2.1.Major proteome variations associated with cherry tomato pericarp development and ripening.Data analysis and bioinformatics tools for tandem mass spectrometry in proteomics.Building consensus spectral libraries for peptide identification in proteomics.LC-MSsim--a simulation software for liquid chromatography mass spectrometry data Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics.Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger.Bioinformatics analysis of mass spectrometry-based proteomics data sets.MRM screening/biomarker discovery with linear ion trap MS: a library of human cancer-specific peptides Proteomics data repositories NCBI Peptidome: a new repository for mass spectrometry proteomics data.mspecLINE: bridging knowledge of human disease with the proteome.

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P2860

Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry

http://www.wikidata.org/entity/Q24805791

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Integration with the human gen ...... h-throughput mass spectrometry

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Alexey I Nesvizhskii

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Bernd Wollscheid

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Eugene C Yi

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Floyd Kregenow

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P2860

Initial sequencing and analysis of the human genome

The distributed annotation system

The Sequence of the Human Genome

A vision for the future of genomics research

The Bioperl toolkit: Perl modules for the life sciences

Integrative annotation of 21,037 human genes validated by full-length cDNA clones

Basic local alignment search tool

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

Large-scale analysis of the yeast proteome by multidimensional protein identification technology

Identification of putative noncoding RNAs among the RIKEN mouse full-length cDNA collection

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