Evaluation of methods for oligonucleotide array data via quantitative real-time PCR - Test2 - elhamkhani - TriplyDB

Evaluation of methods for oligonucleotide array data via quantitative real-time PCR

Evaluation of methods for oligonucleotide array data via quantitative real-time PCR

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Context-specific metabolic networks are consistent with experiments A Web-based and Grid-enabled dChip version for the analysis of large sets of gene expression data Activation of MAPK pathways links LMNA mutations to cardiomyopathy in Emery-Dreifuss muscular dystrophy.Endogenous control genes in complex vascular tissue samples.Evaluating methods for ranking differentially expressed genes applied to microArray quality control data.Analysis of probe level patterns in Affymetrix microarray data.Quantitative methods for genome-scale analysis of in situ hybridization and correlation with microarray data.Nuclear envelope transmembrane proteins (NETs) that are up-regulated during myogenesis.Intercenter reliability and validity of the rhesus macaque GeneChip Transcriptional profiling of C57 and DBA strains of mice in the absence and presence of morphine.Fisher's combined p-value for detecting differentially expressed genes using Affymetrix expression arrays.A kinetic-based sigmoidal model for the polymerase chain reaction and its application to high-capacity absolute quantitative real-time PCR.Cross-platform comparison of SYBR Green real-time PCR with TaqMan PCR, microarrays and other gene expression measurement technologies evaluated in the MicroArray Quality Control (MAQC) study.Background correction using dinucleotide affinities improves the performance of GCRMA.A Bayesian calibration model for combining different pre-processing methods in Affymetrix chips.Comparative analysis of methods for gene transcription profiling data derived from different microarray technologies in rat and mouse models of diabetes.A practical platform for blood biomarker study by using global gene expression profiling of peripheral whole blood.Evaluation of microarray preprocessing algorithms based on concordance with RT-PCR in clinical samples.Selective control of primer usage in multiplex one-step reverse transcription PCR Probe set filtering increases correlation between Affymetrix GeneChip and qRT-PCR expression measurements.Comparison of lung cancer cell lines representing four histopathological subtypes with gene expression profiling using quantitative real-time PCR.Dynamics of dendritic cell maturation are identified through a novel filtering strategy applied to biological time-course microarray replicates Rs5848 variant influences GRN mRNA levels in brain and peripheral mononuclear cells in patients with Alzheimer's disease.Concomitant heterochromatinisation and down-regulation of gene expression unveils epigenetic silencing of RELB in an aggressive subset of chronic lymphocytic leukemia in males Limited redundancy in genes regulated by Cyclin T2 and Cyclin T1.Functional Genomics and a New Era in Radiation Biology and Oncology.CGG repeats in RNA modulate expression of TDP-43 in mouse and fly models of fragile X tremor ataxia syndrome Activation of MAPK in hearts of EMD null mice: similarities between mouse models of X-linked and autosomal dominant Emery Dreifuss muscular dystrophy.Gene expression analysis of peripheral blood cells reveals Toll-like receptor pathway deregulation in colorectal cancer Upregulation of mouse genes in HSV-1 latent TG after butyrate treatment implicates the multiple roles of the LAT-ICP0 locus.Evaluation of reference genes for gene expression analysis using quantitative RT-PCR in Azospirillum brasilense Individual differences in neurocognitive aging of the medial temporal lobe.Impairment of organ-specific T cell negative selection by diabetes susceptibility genes: genomic analysis by mRNA profiling Real-time PCR machine system modeling and a systematic approach for the robust design of a real-time PCR-on-a-chip system.Faecal ribosomal protein L19 is a genetic prognostic factor for survival in colorectal cancer.Transcriptional and enzymatic profiling of Pleurotus ostreatus laccase genes in submerged and solid-state fermentation cultures Biomarkers for Bone Tumours: Discovery from Genomics and Proteomics Studies and Their Challenges.Function annotation of an SBP-box gene in Arabidopsis based on analysis of co-expression networks and promoters Development of Insulin Resistance through Induction of miRNA-135 in C2C12 Cells Heat-induced reactivation of HSV-1 in latent mice: upregulation in the TG of CD83 and other immune response genes and their LAT-ICP0 locus.

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Evaluation of methods for oligonucleotide array data via quantitative real-time PCR

http://www.wikidata.org/entity/Q25257085

description

2006 nî lūn-bûn

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2006 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2006 թվականի հունվարին հրատարակված գիտական հոդված

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2006年の論文

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2006年論文

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2006年論文

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2006年論文

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2006年論文

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2006年論文

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2006年论文

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name

Evaluation of methods for oligonucleotide array data via quantitative real-time PCR

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Evaluation of methods for oligonucleotide array data via quantitative real-time PCR

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Evaluation of methods for oligonucleotide array data via quantitative real-time PCR

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type

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Evaluation of methods for oligonucleotide array data via quantitative real-time PCR

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Evaluation of methods for oligonucleotide array data via quantitative real-time PCR

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Evaluation of methods for oligonucleotide array data via quantitative real-time PCR

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Evaluation of methods for oligonucleotide array data via quantitative real-time PCR

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Evaluation of methods for oligonucleotide array data via quantitative real-time PCR

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Evaluation of methods for oligonucleotide array data via quantitative real-time PCR

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BMC Bioinformatics

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Evaluation of methods for oligonucleotide array data via quantitative real-time PCR

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Daryl E Morris

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Francesca N Hudson

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Li-Xuan Qin

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Nancy J Linford

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Richard P Beyer

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Preferred analysis methods for Affymetrix GeneChips revealed by a wholly defined control dataset

Bioconductor: open software development for computational biology and bioinformatics

Correlation test to assess low-level processing of high-density oligonucleotide microarray data

Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data

A class of models for analyzing GeneChip gene expression analysis array data

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection

A new mathematical model for relative quantification in real-time RT-PCR

Summaries of Affymetrix GeneChip probe level data

Variance stabilization applied to microarray data calibration and to the quantification of differential expression

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M Kathleen Kerr

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1024215402

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16417622

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1360686

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