SIFTS: Structure Integration with Function, Taxonomy and Sequences resource - Test2 - elhamkhani - TriplyDB

SIFTS: Structure Integration with Function, Taxonomy and Sequences resource

SIFTS: Structure Integration with Function, Taxonomy and Sequences resource

http://www.wikidata.org/entity/Q27614957

about

PDBsum additions The European Bioinformatics Institute's data resources 2014 Identifying three-dimensional structures of autophosphorylation complexes in crystals of protein kinases The SWISS-MODEL Repository-new features and functionality Automatic generation of bioinformatics tools for predicting protein-ligand binding sites Comprehensive assessment of cancer missense mutation clustering in protein structures Quantification of the impact of PSI:Biology according to the annotations of the determined structures Pfam: the protein families database iPfam: a database of protein family and domain interactions found in the Protein Data Bank An inter-species protein-protein interaction network across vast evolutionary distance Negatome 2.0: a database of non-interacting proteins derived by literature mining, manual annotation and protein structure analysis AMASS: a database for investigating protein structures.KnotProt: a database of proteins with knots and slipknots Protein structure annotation resources.A method of searching for related literature on protein structure analysis by considering a user's intention.An Evolutionary View on Disulfide Bond Connectivities Prediction Using Phylogenetic Trees and a Simple Cysteine Mutation Model CoDNaS 2.0: a comprehensive database of protein conformational diversity in the native state.ProSAT+: visualizing sequence annotations on 3D structure.TMSEG: Novel prediction of transmembrane helices.The 2013 Nucleic Acids Research Database Issue and the online molecular biology database collection.PDBe: improved accessibility of macromolecular structure data from PDB and EMDB DISOPRED3: precise disordered region predictions with annotated protein-binding activity How community has shaped the Protein Data Bank.PDBe: Protein Data Bank in Europe Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank.Using the Tools and Resources of the RCSB Protein Data Bank.Protein Data Bank Japan (PDBj): updated user interfaces, resource description framework, analysis tools for large structures The RCSB protein data bank: integrative view of protein, gene and 3D structural information.Aggregation prone regions in human proteome: Insights from large-scale data analyses.Why human disease-associated residues appear as the wild-type in other species: genome-scale structural evidence for the compensation hypothesis.MobiDB 2.0: an improved database of intrinsically disordered and mobile proteins.The Pfam protein families database: towards a more sustainable future.The role of structural bioinformatics resources in the era of integrative structural biology.A 3D cellular context for the macromolecular world.Conformational analysis of the DFG-out kinase motif and biochemical profiling of structurally validated type II inhibitors.Multi-level machine learning prediction of protein-protein interactions in Saccharomyces cerevisiae.Mutation in BMPR2 Promoter: A 'Second Hit' for Manifestation of Pulmonary Arterial Hypertension?Runs of homozygosity and distribution of functional variants in the cattle genome Genome and network visualization facilitates the analyses of the effects of drugs and mutations on protein-protein and drug-protein networks.Ensembler: Enabling High-Throughput Molecular Simulations at the Superfamily Scale

P2860

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P2860

SIFTS: Structure Integration with Function, Taxonomy and Sequences resource

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2013 nî lūn-bûn

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2013 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2013年の論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年论文

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name

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Nucleic Acids Research

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SIFTS: Structure Integration with Function, Taxonomy and Sequences resource

@en

P2093

Jie Luo

http://www.w3.org/2001/XMLSchema#string

Thomas J Oldfield

http://www.w3.org/2001/XMLSchema#string

P2860

The RCSB PDB information portal for structural genomics.

E-MSD: an integrated data resource for bioinformatics

IntEnz, the integrated relational enzyme database

HMMER web server: interactive sequence similarity searching

EMDataBank.org: unified data resource for CryoEM

Extending CATH: increasing coverage of the protein structure universe and linking structure with function

The Pfam protein families database

InterPro in 2011: new developments in the family and domain prediction database

The 2012 Nucleic Acids Research Database Issue and the online Molecular Biology Database Collection

Assignment of protein sequences to existing domain and family classification systems: Pfam and the PDB

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D483-9

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scholarly article

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10.1093/NAR/GKS1258

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Database issue

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41

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Glen van Ginkel

Claire O'Donovan

Maria-Jesus Martin

Sameer Velankar

Gerard Kleywegt

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2013-01-01T00:00:00Z

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233829836

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23203869

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3531078

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