Structure and mechanism of T4 polynucleotide kinase: an RNA repair enzyme. - Test2 - elhamkhani - TriplyDB

Structure and mechanism of T4 polynucleotide kinase: an RNA repair enzyme.

Structure and mechanism of T4 polynucleotide kinase: an RNA repair enzyme.

http://www.wikidata.org/entity/Q27639342

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Real-time investigation of nucleic acids phosphorylation process using molecular beacons.Structure-function analysis of the kinase-CPD domain of yeast tRNA ligase (Trl1) and requirements for complementation of tRNA splicing by a plant Trl1 homolog.Recognition of DNA substrates by T4 bacteriophage polynucleotide kinase Structure–function analysis of the 3′ phosphatase component of T4 polynucleotide kinase/phosphatase Structure and mechanism of the polynucleotide kinase component of the bacterial Pnkp-Hen1 RNA repair system Structure and mechanism of the 2',3' phosphatase component of the bacterial Pnkp-Hen1 RNA repair system Structural and Biochemical Analysis of the Phosphate Donor Specificity of the Polynucleotide Kinase Component of the Bacterial Pnkp•Hen1 RNA Repair System 3′-Processing and strand transfer catalysed by retroviral integrasein crystallo Structures of bacterial polynucleotide kinase in a Michaelis complex with GTP•Mg2+ and 5'-OH oligonucleotide and a product complex with GDP•Mg2+ and 5'-PO4 oligonucleotide reveal a mechanism of general acid-base catalysis and the determinants of pho XRCC1 stimulates polynucleotide kinase by enhancing its damage discrimination and displacement from DNA repair intermediates Structural similarities and functional differences clarify evolutionary relationships between tRNA healing enzymes and the myelin enzyme CNPase Schizosaccharomyces pombe carboxyl-terminal domain (CTD) phosphatase Fcp1: distributive mechanism, minimal CTD substrate, and active site mapping.Mutational analysis of the 5'-OH oligonucleotide phosphate acceptor site of T4 polynucleotide kinase Impact of DNA3'pp5'G capping on repair reactions at DNA 3' ends.The genome of the novel phage Rtp, with a rosette-like tail tip, is homologous to the genome of phage T1 Characterization and evolutionary history of an archaeal kinase involved in selenocysteinyl-tRNA formation.Tidying up loose ends: the role of polynucleotide kinase/phosphatase in DNA strand break repair.Probe-Directed Degradation (PDD) for Flexible Removal of Unwanted cDNA Sequences from RNA-Seq Libraries.RNA damage in biological conflicts and the diversity of responding RNA repair systems Kinetics of binding of fluorescent ligands to enzymes with engineered access tunnels.Enzyme Tunnels and Gates As Relevant Targets in Drug Design.Characterization of the 2',3' cyclic phosphodiesterase activities of Clostridium thermocellum polynucleotide kinase-phosphatase and bacteriophage lambda phosphatase The effector AvrRxo1 phosphorylates NAD in planta.Portability and fidelity of RNA-repair systems.DNA Oligonucleotide 3'-Phosphorylation by a DNA Enzyme.Characterization of a thermostable archaeal polynucleotide kinase homologous to human Clp1.Effects of 3'-OH and 5'-PO4 base mispairs and damaged base lesions on the fidelity of nick sealing by Deinococcus radiodurans RNA ligase Diversity and roles of (t)RNA ligases.Structures of bacterial polynucleotide kinase in a michaelis complex with nucleoside triphosphate (NTP)-Mg2+ and 5'-OH RNA and a mixed substrate-product complex with NTP-Mg2+ and a 5'-phosphorylated oligonucleotide.Characterization of polynucleotide kinase/phosphatase enzymes from Mycobacteriophages omega and Cjw1 and vibriophage KVP40.Distinctive kinetics and substrate specificities of plant and fungal tRNA ligases The essential function of the Trypanosoma brucei Trl1 homolog in procyclic cells is maturation of the intron-containing tRNATyr.An amplified fluorescence detection of T4 polynucleotide kinase activity based on coupled exonuclease III reaction and a graphene oxide platform.Characterization of Runella slithyformis HD-Pnk, a bifunctional DNA/RNA end-healing enzyme composed of an N-terminal 2',3' -phosphoesterase HD domain and a C-terminal 5' -OH polynucleotide kinase domain.Luminescent Strategies for Label-free G-quadruplex-based Enzyme Activity Sensing.Effects of vinylphosphonate internucleotide linkages on the cleavage specificity of exonuclease III and on the activity of DNA polymerase I.Mechanism of RNA 2',3'-cyclic phosphate end healing by T4 polynucleotide kinase-phosphatase.A label-free cyclic assembly of G-quadruplex nanowires for cascade amplification detection of T4 polynucleotide kinase activity and inhibition.One-strand oligonucleotide probe for fluorescent label-free "turn-on" detection of T4 polynucleotide kinase activity and its inhibition.A kinetic framework for tRNA ligase and enforcement of a 2'-phosphate requirement for ligation highlights the design logic of an RNA repair machine.

P2860

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P2860

Structure and mechanism of T4 polynucleotide kinase: an RNA repair enzyme.

http://www.wikidata.org/entity/Q27639342

description

2002 nî lūn-bûn

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2002 թուականի Յուլիսին հրատարակուած գիտական յօդուած

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2002年の論文

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2002年論文

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2002年論文

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2002年論文

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2002年論文

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2002年論文

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2002年论文

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name

Structure and mechanism of T4 polynucleotide kinase: an RNA repair enzyme

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Structure and mechanism of T4 polynucleotide kinase: an RNA repair enzyme.

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Structure and mechanism of T4 polynucleotide kinase: an RNA repair enzyme.

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Structure and mechanism of T4 polynucleotide kinase: an RNA repair enzyme

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Structure and mechanism of T4 polynucleotide kinase: an RNA repair enzyme.

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Structure and mechanism of T4 polynucleotide kinase: an RNA repair enzyme.

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Structure and mechanism of T4 polynucleotide kinase: an RNA repair enzyme

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Structure and mechanism of T4 polynucleotide kinase: an RNA repair enzyme.

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Structure and mechanism of T4 polynucleotide kinase: an RNA repair enzyme.

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The EMBO Journal

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Structure and mechanism of T4 polynucleotide kinase: an RNA repair enzyme.

@en

P2093

Christopher D Lima

http://www.w3.org/2001/XMLSchema#string

Li Kai Wang

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P2860

Molecular cloning of the human gene, PNKP, encoding a polynucleotide kinase 3'-phosphatase and evidence for its role in repair of DNA strand breaks caused by oxidative damage

Molecular characterization of a human DNA kinase

The crystal structures of chloramphenicol phosphotransferase reveal a novel inactivation mechanism

Improved methods for building protein models in electron density maps and the location of errors in these models

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

Refined structure of porcine cytosolic adenylate kinase at 2.1 A resolution

The crystal structure of the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase reveals distinct domain homologies

Crystal structures of Bacillus stearothermophilus adenylate kinase with bound Ap5A, Mg2+ Ap5A, and Mn2+ Ap5A reveal an intermediate lid position and six coordinate octahedral geometry for bound Mg2+ and Mn2+

SETOR: hardware-lighted three-dimensional solid model representations of macromolecules

Protein structure comparison by alignment of distance matrices

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4042345

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10.1093/EMBOJ/CDF397

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21

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12110598

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126130

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