ESG: extended similarity group method for automated protein function prediction - Test2 - elhamkhani - TriplyDB

ESG: extended similarity group method for automated protein function prediction

ESG: extended similarity group method for automated protein function prediction

http://www.wikidata.org/entity/Q27972199

about

A large-scale evaluation of computational protein function prediction The use of evolutionary patterns in protein annotation Phosphoproteomics reveals malaria parasite Protein Kinase G as a signalling hub regulating egress and invasion.The schistosome oesophageal gland: initiator of blood processing Protein function prediction: towards integration of similarity metrics.Isofunctional Protein Subfamily Detection Using Data Integration and Spectral Clustering Inactivation of a Plasmodium apicoplast protein attenuates formation of liver merozoites Validation of metal-binding sites in macromolecular structures with the CheckMyMetal web server.Quantification of protein group coherence and pathway assignment using functional association.The PFP and ESG protein function prediction methods in 2014: effect of database updates and ensemble approaches.Combining modularity, conservation, and interactions of proteins significantly increases precision and coverage of protein function prediction Functional enrichment analyses and construction of functional similarity networks with high confidence function prediction by PFP.An orthology-based analysis of pathogenic protozoa impacting global health: an improved comparative genomics approach with prokaryotes and model eukaryote orthologs.Deciphering the glycogenome of schistosomes EnzymeDetector: an integrated enzyme function prediction tool and database.CombFunc: predicting protein function using heterogeneous data sources Real-time ligand binding pocket database search using local surface descriptors Evaluation of function predictions by PFP, ESG,and PSI-BLAST for moonlighting proteins.In-depth performance evaluation of PFP and ESG sequence-based function prediction methods in CAFA 2011 experiment Homology-based inference sets the bar high for protein function prediction PFP/ESG: automated protein function prediction servers enhanced with Gene Ontology visualization tool.Genome-scale identification and characterization of moonlighting proteins.Evidence for a retroviral insertion in TRPM1 as the cause of congenital stationary night blindness and leopard complex spotting in the horse.Ancient origin of the biosynthesis of lignin precursors INGA: protein function prediction combining interaction networks, domain assignments and sequence similarity.Structure- and sequence-based function prediction for non-homologous proteins Exploring Mouse Protein Function via Multiple Approaches.Protein domain recurrence and order can enhance prediction of protein functions.NaviGO: interactive tool for visualization and functional similarity and coherence analysis with gene ontology.Mycoplasma haemocanis--the canine hemoplasma and its feline counterpart in the genomic era Integrated protein function prediction by mining function associations, sequences, and protein-protein and gene-gene interaction networks.Indole-3-Acetic Acid Is Produced by Emiliania huxleyi Coccolith-Bearing Cells and Triggers a Physiological Response in Bald Cells.Missing gene identification using functional coherence scores Computational characterization of moonlighting proteins.The discovery of phiAGATE, a novel phage infecting Bacillus pumilus, leads to new insights into the phylogeny of the subfamily Spounavirinae.Using PFP and ESG Protein Function Prediction Web Servers.Protein function prediction using domain families.MPFit: Computational Tool for Predicting Moonlighting Proteins.Computational Methods for Annotation Transfers from Sequence.Computational prediction of protein function based on weighted mapping of domains and GO terms.

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P2860

ESG: extended similarity group method for automated protein function prediction

http://www.wikidata.org/entity/Q27972199

description

2009 nî lūn-bûn

@nan

2009 թուականի Յուլիսին հրատարակուած գիտական յօդուած

@hyw

2009 թվականի հուլիսին հրատարակված գիտական հոդված

@hy

2009年の論文

@ja

2009年論文

@yue

2009年論文

@zh-hant

2009年論文

@zh-hk

2009年論文

@zh-mo

2009年論文

@zh-tw

2009年论文

@wuu

name

ESG: extended similarity group method for automated protein function prediction

@ast

ESG: extended similarity group method for automated protein function prediction

@en

ESG: extended similarity group method for automated protein function prediction

@nl

type

label

ESG: extended similarity group method for automated protein function prediction

@ast

ESG: extended similarity group method for automated protein function prediction

@en

ESG: extended similarity group method for automated protein function prediction

@nl

prefLabel

ESG: extended similarity group method for automated protein function prediction

@ast

ESG: extended similarity group method for automated protein function prediction

@en

ESG: extended similarity group method for automated protein function prediction

@nl

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P1433

P1476

ESG: extended similarity group method for automated protein function prediction

@en

P2093

Changsoon Park

http://www.w3.org/2001/XMLSchema#string

Meghana Chitale

http://www.w3.org/2001/XMLSchema#string

Troy Hawkins

http://www.w3.org/2001/XMLSchema#string

P2860

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

GOPET: a tool for automated predictions of Gene Ontology terms.

The Universal Protein Resource (UniProt)

KEGG for linking genomes to life and the environment

ProtoNet 4.0: a hierarchical classification of one million protein sequences

GOtcha: a new method for prediction of protein function assessed by the annotation of seven genomes

Basic local alignment search tool

The Gene Ontology (GO) database and informatics resource

PFP: Automated prediction of gene ontology functional annotations with confidence scores using protein sequence data

Functionality of System Components: Conservation of Protein Function in Protein Feature Space

P304

1739-45

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P3181

958225

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P356

10.1093/BIOINFORMATICS/BTP309

http://www.w3.org/2001/XMLSchema#string

P407

P433

14

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P478

25

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P50

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2009-07-15T00:00:00Z

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P5875

24421176

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P698

19435743

http://www.w3.org/2001/XMLSchema#string

P921

conserved Plasmodium protein, unknown function

DNA2/NAM7 helicase, putative

BET1-like protein, putative

methyltransferase, putative

SND2 domain-containing protein, putative

conserved Plasmodium membrane protein, unknown function

autophagy-related protein 11, putative

glycosyltransferase

seipin domain-containing protein, putative

P932

2705228

http://www.w3.org/2001/XMLSchema#string