IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies - Test2 - elhamkhani - TriplyDB

IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies

IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies

http://www.wikidata.org/entity/Q28250973

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Assessing the global threat from Zika virus Discovery of methylfarnesoate as the annelid brain hormone reveals an ancient role of sesquiterpenoids in reproduction Untangling the early diversification of eukaryotes: a phylogenomic study of the evolutionary origins of Centrohelida, Haptophyta and Cryptista Uncertain-tree: discriminating among competing approaches to the phylogenetic analysis of phenotype data The Evolution of Silicon Transport in Eukaryotes Parallel evolution of highly conserved plastid genome architecture in red seaweeds and seed plants Integration of Morphological Data into Molecular Phylogenetic Analysis: Toward the Identikit of the Stylasterid Ancestor Macroevolution of hyperdiverse flightless beetles reflects the complex geological history of the Sunda Arc Worldwide Phylogenetic Distributions and Population Dynamics of the Genus Histoplasma Comparative genomics explains the evolutionary success of reef-forming corals Monogenean anchor morphometry: systematic value, phylogenetic signal, and evolution Local Population Structure and Patterns of Western Hemisphere Dispersal for Coccidioides spp., the Fungal Cause of Valley Fever Whole Genome Sequencing of the Asian Arowana (Scleropages formosus) Provides Insights into the Evolution of Ray-Finned Fishes Out of the Reservoir: Phenotypic and Genotypic Characterization of a Novel Cowpox Virus Isolated from a Common Vole Aspergillus is monophyletic: Evidence from multiple gene phylogenies and extrolites profiles Expansion of the molecular and morphological diversity of Acanthamoebidae (Centramoebida, Amoebozoa) and identification of a novel life cycle type within the group.Evolutionary history of Podarcis tiliguerta on Corsica and Sardinia Biogeography and Character Evolution of the Ciliate Genus Euplotes (Spirotrichea, Euplotia), with Description of Euplotes curdsi sp. nov Terrace Aware Data Structure for Phylogenomic Inference from Supermatrices Two complete mitochondrial genomes from Praticolella mexicana Perez, 2011 (Polygyridae) and gene order evolution in Helicoidea (Mollusca, Gastropoda)Phylogenetic Insights into Chinese Rubus (Rosaceae) from Multiple Chloroplast and Nuclear DNAs Fungal Planet description sheets: 400-468 Heme pathway evolution in kinetoplastid protists Large-scale molecular phylogeny of Cryptorhynchinae (Coleoptera, Curculionidae) from multiple genes suggests American origin and later Australian radiation Complete Genome Sequences of Identical Zika virus Isolates in a Nursing Mother and Her Infant.The global antigenic diversity of swine influenza A viruses.Metabolic connectivity as a driver of host and endosymbiont integration.Next-generation systematics: An innovative approach to resolve the structure of complex prokaryotic taxa.Mitochondrial DNA and trade data support multiple origins of Helicoverpa armigera (Lepidoptera, Noctuidae) in Brazil.Microenvironment and phylogenetic diversity of Prochloron inhabiting the surface of crustose didemnid ascidians.Wolbachia distribution in selected beetle taxa characterized by PCR screens and MLST data.Streptomyces aridus sp. nov., isolated from a high altitude Atacama Desert soil and emended description of Streptomyces noboritoensis Isono et al. 1957 Chloroplast Genome Analysis of Resurrection Tertiary Relict Haberlea rhodopensis Highlights Genes Important for Desiccation Stress Response Classification of Cowpox Viruses into Several Distinct Clades and Identification of a Novel Lineage.Revision of the Neotropical water scavenger beetle genus Tobochares Short & García, 2007 (Coleoptera, Hydrophilidae, Acidocerinae)Transmission patterns and evolution of respiratory syncytial virus in a community outbreak identified by genomic analysis.State aggregation for fast likelihood computations in molecular evolution.Overcoming the loss of blue sensitivity through opsin duplication in the largest animal group, beetles Phylogenetic analysis of emergent Streptococcus pneumoniae serotype 22F causing invasive pneumococcal disease using whole genome sequencing.Genetic Variability of Koi Herpesvirus In vitro-A Natural Event?

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IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies

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IQ-TREE: a fast and effective ...... maximum-likelihood phylogenies

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IQ-TREE: a fast and effective ...... maximum-likelihood phylogenies

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IQ-TREE: a fast and effective ...... maximum-likelihood phylogenies

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IQ-TREE: a fast and effective ...... maximum-likelihood phylogenies

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Molecular Biology and Evolution

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IQ-TREE: a fast and effective ...... maximum-likelihood phylogenies

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Arndt von Haeseler

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Heiko A Schmidt

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Lam-Tung Nguyen

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New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

Evolutionary trees from DNA sequences: a maximum likelihood approach

A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood

Ultrafast approximation for phylogenetic bootstrap

Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods

BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data

A new method for calculating evolutionary substitution rates

A genetic algorithm for maximum-likelihood phylogeny inference using nucleotide sequence data.

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