IMG/M: the integrated metagenome data management and comparative analysis system - Test2 - elhamkhani - TriplyDB

IMG/M: the integrated metagenome data management and comparative analysis system

IMG/M: the integrated metagenome data management and comparative analysis system

http://www.wikidata.org/entity/Q28253050

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Gene sets for utilization of primary and secondary nutrition supplies in the distal gut of endangered Iberian lynx News in livestock research - use of Omics-technologies to study the microbiota in the gastrointestinal tract of farm animals The Road to Metagenomics: From Microbiology to DNA Sequencing Technologies and Bioinformatics Web Resources for Metagenomics Studies Metagenomic surveys of gut microbiota Computational meta'omics for microbial community studies Compareads: comparing huge metagenomic experiments Host-Microbiome Interaction and Cancer: Potential Application in Precision Medicine The role of biofilms as environmental reservoirs of antibiotic resistance New classes of self-cleaving ribozymes revealed by comparative genomics analysis Validation of high throughput sequencing and microbial forensics applications.Probabilistic inference of biochemical reactions in microbial communities from metagenomic sequences Proteogenomic analysis of a thermophilic bacterial consortium adapted to deconstruct switchgrass Unlocking the potential of metagenomics through replicated experimental design A comparative metagenome survey of the fecal microbiota of a breast- and a plant-fed Asian elephant reveals an unexpectedly high diversity of glycoside hydrolase family enzymes Diverse capacity for 2-methylhopanoid production correlates with a specific ecological niche Metagenomics of hydrocarbon resource environments indicates aerobic taxa and genes to be unexpectedly common Single-cell genomics reveals complex carbohydrate degradation patterns in poribacterial symbionts of marine sponges EBI metagenomics--a new resource for the analysis and archiving of metagenomic data.Reconstructing a Thauera genome from a hydrogenotrophic-denitrifying consortium using metagenomic sequence data.Probiotic Bifidobacterium longum alters gut luminal metabolism through modification of the gut microbial community.Third generation sequencing technologies applied to diagnostic microbiology: benefits and challenges in applications and data analysis.Metagenomes from the saline desert of kutch.Metasecretome-selective phage display approach for mining the functional potential of a rumen microbial community Microbial succession in the gut: directional trends of taxonomic and functional change in a birth cohort of Spanish infants.Insights into archaeal evolution and symbiosis from the genomes of a nanoarchaeon and its inferred crenarchaeal host from Obsidian Pool, Yellowstone National Park Comparative analysis of functional metagenomic annotation and the mappability of short reads.Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California.Statistical approach of functional profiling for a microbial community.MetaProx: the database of metagenomic proximons MetaMicrobesOnline: phylogenomic analysis of microbial communities.Functional assignment of metagenomic data: challenges and applications.IMG/M-HMP: a metagenome comparative analysis system for the Human Microbiome Project.Short-read reading-frame predictors are not created equal: sequence error causes loss of signal The genome portal of the Department of Energy Joint Genome Institute: 2014 updates.Current opportunities and challenges in microbial metagenome analysis--a bioinformatic perspective MOCAT: a metagenomics assembly and gene prediction toolkit vanI: a novel D-Ala-D-Lac vancomycin resistance gene cluster found in Desulfitobacterium hafniense.The yjdF riboswitch candidate regulates gene expression by binding diverse azaaromatic compounds.Determining microbial products and identifying molecular targets in the human microbiome.

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IMG/M: the integrated metagenome data management and comparative analysis system

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2012 nî lūn-bûn

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2012 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2012 թվականի հունվարին հրատարակված գիտական հոդված

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2012年の論文

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IMG/M: the integrated metagenome data management and comparative analysis system

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Nucleic Acids Research

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Ernest Szeto

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I-Min A Chen

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A primer on metagenomics

The COG database: an updated version includes eukaryotes

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

Rfam: annotating non-coding RNAs in complete genomes

Ab initio gene identification in metagenomic sequences

KEGG for representation and analysis of molecular networks involving diseases and drugs

The Pfam protein families database

Infernal 1.0: inference of RNA alignments

InterPro: the integrative protein signature database

RNAmmer: consistent and rapid annotation of ribosomal RNA genes

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40

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Krishna Palaniappan

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Natalia N. Ivanova

Nikos C. Kyrpides

Marcel Huntemann

Iain J. Anderson

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2012-01-01T00:00:00Z

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22086953

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data management

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3245048

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