Characterization of the mechanical unfolding of RNA pseudoknots
about
HIV-1 frameshift efficiency is primarily determined by the stability of base pairs positioned at the mRNA entrance channel of the ribosomeFrameshifting RNA pseudoknots: structure and mechanismRibosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious useDirectional mechanical stability of Bacteriophage φ29 motor's 3WJ-pRNA: Extraordinary robustness along portal axisFolding and unfolding single RNA molecules under tension.RNA pseudoknots: folding and finding.Stimulation of ribosomal frameshifting by antisense LNARNA reactions one molecule at a timeAdvances in RNA structure prediction from sequence: new tools for generating hypotheses about viral RNA structure-function relationshipsFree energy landscape and multiple folding pathways of an H-type RNA pseudoknot.Revealing -1 programmed ribosomal frameshifting mechanisms by single-molecule techniques and computational methodsSingle-molecule mechanical unfolding and folding of a pseudoknot in human telomerase RNA.Spacer-length dependence of programmed -1 or -2 ribosomal frameshifting on a U6A heptamer supports a role for messenger RNA (mRNA) tension in frameshifting.Programmed -1 frameshifting efficiency correlates with RNA pseudoknot conformational plasticity, not resistance to mechanical unfoldingThe stimulatory RNA of the Visna-Maedi retrovirus ribosomal frameshifting signal is an unusual pseudoknot with an interstem element.Mimicking Ribosomal Unfolding of RNA Pseudoknot in a Protein Channel.An RNA Element That Facilitates Programmed Ribosomal Readthrough in Turnip Crinkle Virus Adopts Multiple ConformationsA new computational approach for mechanical folding kinetics of RNA hairpins.Triplex structures in an RNA pseudoknot enhance mechanical stability and increase efficiency of -1 ribosomal frameshifting.A genome-wide analysis of RNA pseudoknots that stimulate efficient -1 ribosomal frameshifting or readthrough in animal virusesFootprinting analysis of BWYV pseudoknot-ribosome complexes.Mechanical unfolding of two DIS RNA kissing complexes from HIV-1.Folding behavior of a T-shaped, ribosome-binding translation enhancer implicated in a wide-spread conformational switch.Folding a stable RNA pseudoknot through rearrangement of two hairpin structures.Cooperative and directional folding of the preQ1 riboswitch aptamer domain.Stem-loop structures can effectively substitute for an RNA pseudoknot in -1 ribosomal frameshifting.Mechanical unfolding kinetics of the SRV-1 gag-pro mRNA pseudoknot: possible implications for -1 ribosomal frameshifting stimulation.Predicting ribosomal frameshifting efficiency.mRNA pseudoknot structures can act as ribosomal roadblocks.Combined single molecule experimental and computational approaches for understanding the unfolding pathway of a viral translation enhancer that participates in a conformational switch.Functional analysis of the SRV-1 RNA frameshifting pseudoknot.Salt Effects on the Thermodynamics of a Frameshifting RNA Pseudoknot under Tension.Direct observation of distinct A/P hybrid-state tRNAs in translocating ribosomes.Single-molecule measurements of the CCR5 mRNA unfolding pathways.Stimulation of ribosomal frameshifting by RNA G-quadruplex structures.Conformational dynamics of the frameshift stimulatory structure in HIV-1.Possible involvement of coaxially stacked double pseudoknots in the regulation of -1 programmed ribosomal frameshifting in RNA viruses.Strategies for recognition of stem-loop RNA structures by synthetic ligands: application to the HIV-1 frameshift stimulatory sequence.Interaction of the HIV-1 frameshift signal with the ribosome.Mg2+ -Dependent High Mechanical Anisotropy of Three-Way-Junction pRNA as Revealed by Single-Molecule Force Spectroscopy.
P2860
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P2860
Characterization of the mechanical unfolding of RNA pseudoknots
description
2008 nî lūn-bûn
@nan
2008 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
2008 թվականի հունվարին հրատարակված գիտական հոդված
@hy
2008年の論文
@ja
2008年論文
@yue
2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
name
Characterization of the mechanical unfolding of RNA pseudoknots
@ast
Characterization of the mechanical unfolding of RNA pseudoknots
@en
Characterization of the mechanical unfolding of RNA pseudoknots
@nl
type
label
Characterization of the mechanical unfolding of RNA pseudoknots
@ast
Characterization of the mechanical unfolding of RNA pseudoknots
@en
Characterization of the mechanical unfolding of RNA pseudoknots
@nl
prefLabel
Characterization of the mechanical unfolding of RNA pseudoknots
@ast
Characterization of the mechanical unfolding of RNA pseudoknots
@en
Characterization of the mechanical unfolding of RNA pseudoknots
@nl
P2093
P3181
P1476
Characterization of the mechanical unfolding of RNA pseudoknots
@en
P2093
Chul-Hyun Kim
Ignacio Tinoco
Lisa Green
P304
P3181
P356
10.1016/J.JMB.2007.05.058
P407
P577
2008-01-11T00:00:00Z