Inferred Biomolecular Interaction Server--a web server to analyze and predict protein interacting partners and binding sites - Test2 - elhamkhani - TriplyDB

Inferred Biomolecular Interaction Server--a web server to analyze and predict protein interacting partners and binding sites

Inferred Biomolecular Interaction Server--a web server to analyze and predict protein interacting partners and binding sites

http://www.wikidata.org/entity/Q28261937

about

BISC: binary subcomplexes in proteins database Database resources of the National Center for Biotechnology Information The protein common interface database (ProtCID)--a comprehensive database of interactions of homologous proteins in multiple crystal forms MMDB: 3D structures and macromolecular interactions Caught in self-interaction: evolutionary and functional mechanisms of protein homooligomerization Understanding the fabric of protein crystals: computational classification of biological interfaces and crystal contacts Computational prediction of protein interfaces: A review of data driven methods Surfing the Protein-Protein Interaction Surface Using Docking Methods: Application to the Design of PPI Inhibitors Cancer missense mutations alter binding properties of proteins and their interaction networks A Pan-Cancer Catalogue of Cancer Driver Protein Interaction Interfaces Progress and challenges in predicting protein interfaces Predicting protein-protein interface residues using local surface structural similarity Algorithmic approaches to protein-protein interaction site prediction.Modulating protein-protein interactions with small molecules: the importance of binding hotspots.Characterizing protein domain associations by Small-molecule ligand binding Functional states of homooligomers: insights from the evolution of glycosyltransferases.SCOWLP update: 3D classification of protein-protein, -peptide, -saccharide and -nucleic acid interactions, and structure-based binding inferences across folds.ComSin: database of protein structures in bound (complex) and unbound (single) states in relation to their intrinsic disorder Evolution of protein binding modes in homooligomers.Mutational dynamics of murine angiogenin duplicates.Mechanisms of protein oligomerization, the critical role of insertions and deletions in maintaining different oligomeric states HomPPI: a class of sequence homology based protein-protein interface prediction methods.Knowledge-based annotation of small molecule binding sites in proteins.IBIS (Inferred Biomolecular Interaction Server) reports, predicts and integrates multiple types of conserved interactions for proteins Large-scale mapping of human protein interactome using structural complexes.SPPS: a sequence-based method for predicting probability of protein-protein interaction partners Homology inference of protein-protein interactions via conserved binding sites.Annotation of functional sites with the Conserved Domain Database Exploring the evolution of protein function in Archaea Correlating protein hot spot surface analysis using ProBiS with simulated free energies of protein-protein interfacial residues Coverage of protein domain families with structural protein-protein interactions: current progress and future trends.Tumor-targeted RNA-interference: functional non-viral nanovectors.Dissecting the calcium-induced differentiation of human primary keratinocytes stem cells by integrative and structural network analyses.Pocketome: an encyclopedia of small-molecule binding sites in 4D InterEvol database: exploring the structure and evolution of protein complex interfaces.Structural Perspectives on the Evolutionary Expansion of Unique Protein-Protein Binding Sites.Mutations in the KDM5C ARID Domain and Their Plausible Association with Syndromic Claes-Jensen-Type Disease.Large-Scale Analysis Exploring Evolution of Catalytic Machineries and Mechanisms in Enzyme Superfamilies.Elucidating the druggable interface of protein-protein interactions using fragment docking and coevolutionary analysis.Computational large-scale mapping of protein-protein interactions using structural complexes.

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Inferred Biomolecular Interaction Server--a web server to analyze and predict protein interacting partners and binding sites

http://www.wikidata.org/entity/Q28261937

description

2010 nî lūn-bûn

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2010 թուականի Յունուարին հրատարակուած գիտական յօդուած

@hyw

2010 թվականի հունվարին հրատարակված գիտական հոդված

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2010年の論文

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2010年学术文章

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2010年学术文章

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2010年学术文章

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2010年学术文章

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2010年学术文章

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2010年學術文章

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name

Inferred Biomolecular Interact ...... ing partners and binding sites

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Inferred Biomolecular Interact ...... ing partners and binding sites

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Inferred Biomolecular Interact ...... ing partners and binding sites

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Inferred Biomolecular Interact ...... ing partners and binding sites

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Inferred Biomolecular Interact ...... ing partners and binding sites

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Inferred Biomolecular Interact ...... ing partners and binding sites

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Inferred Biomolecular Interact ...... ing partners and binding sites

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Inferred Biomolecular Interact ...... ing partners and binding sites

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Nucleic Acids Research

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Inferred Biomolecular Interact ...... ing partners and binding sites

@en

P2093

Anna R Panchenko

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Benjamin A Shoemaker

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Dachuan Zhang

http://www.w3.org/2001/XMLSchema#string

Jessica H Fong

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Manoj Tyagi

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Ratna R Thangudu

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Stephen H Bryant

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Thomas Madej

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P2860

CDD: specific functional annotation with the Conserved Domain Database

Can sequence determine function?

Inference of macromolecular assemblies from crystalline state

A protein interaction map of Drosophila melanogaster

The relationship between protein structure and function: a comprehensive survey with application to the yeast genome

Annotation transfer between genomes: protein-protein interologs and protein-DNA regulogs

PubChem: a public information system for analyzing bioactivities of small molecules

A map of the interactome network of the metazoan C. elegans

CD-Search: protein domain annotations on the fly

Surprising similarities in structure comparison

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D518-24

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scholarly article

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10.1093/NAR/GKP842

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Database issue

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38

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Aron Marchler-Bauer

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2010-01-01T00:00:00Z

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38024594

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19843613

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2808861

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