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Mechanisms and dynamics of orphan gene emergence in insect genomes

Mechanisms and dynamics of orphan gene emergence in insect genomes

http://www.wikidata.org/entity/Q28284117

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The life cycle of Drosophila orphan genes Genome sequence of Anopheles sinensis provides insight into genetics basis of mosquito competence for malaria parasites Physiology of the read-write genome Genes from scratch--the evolutionary fate of de novo genes Biochemistry and physiology within the framework of the extended synthesis of evolutionary biology How Do Genomes Create Novel Phenotypes? Insights from the Loss of the Worker Caste in Ant Social Parasites Collembolan Transcriptomes Highlight Molecular Evolution of Hexapods and Provide Clues on the Adaptation to Terrestrial Life Genes associated with ant social behavior show distinct transcriptional and evolutionary patterns Genomic, Transcriptomic and Proteomic Analysis Provide Insights into the Cold Adaptation Mechanism of the Obligate Psychrophilic Fungus Mrakia psychrophila Transcriptome analysis of the whitefly, Bemisia tabaci MEAM1 during feeding on tomato infected with the crinivirus, Tomato chlorosis virus, identifies a temporal shift in gene expression and differential regulation of novel orphan genes."Out of pollen" hypothesis for origin of new genes in flowering plants: study from Arabidopsis thaliana Divergent and conserved elements comprise the chemoreceptive repertoire of the nonblood-feeding mosquito Toxorhynchites amboinensis Pseudogene-derived lncRNAs: emerging regulators of gene expression.Did the fire ant supergene evolve selfishly or socially?Characterizing the infection-induced transcriptome of Nasonia vitripennis reveals a preponderance of taxonomically-restricted immune genes.Social parasitism and the molecular basis of phenotypic evolution.The QQS orphan gene of Arabidopsis modulates carbon and nitrogen allocation in soybean.Long non-coding RNAs as a source of new peptides De novo origin of VCY2 from autosome to Y-transposed amplicon.Evolution of new functions de novo and from preexisting genes.Trends in genome dynamics among major orders of insects revealed through variations in protein families.Lucilia cuprina genome unlocks parasitic fly biology to underpin future interventions.Origins of De Novo Genes in Human and Chimpanzee.First report of Y-linked genes in the kissing bug Rhodnius prolixus.Are orphan genes protein-coding, prediction artifacts, or non-coding RNAs?The Goddard and Saturn Genes Are Essential for Drosophila Male Fertility and May Have Arisen De Novo.Fact or fiction: updates on how protein-coding genes might emerge de novo from previously non-coding DNA.Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies.High GC content causes orphan proteins to be intrinsically disordered.Comparative transcriptomics of Entelegyne spiders (Araneae, Entelegynae), with emphasis on molecular evolution of orphan genes.Draft Genome of the Scarab Beetle Oryctes borbonicus on La Réunion Island.Study of Gene Trafficking between Acanthamoeba and Giant Viruses Suggests an Undiscovered Family of Amoeba-Infecting Viruses Beyond fruit-flies: population genomic advances in non-Drosophila arthropods.Caste-biases in gene expression are specific to developmental stage in the ant Formica exsecta.Comparative analysis of lincRNA in insect species.Gene expression and variation in social aggression by queens of the harvester ant Pogonomyrmex californicus.Identification and evolution of the orphan genes in the domestic silkworm, Bombyx mori.New Genes and Functional Innovation in Mammals.Powerful sequence similarity search methods and in-depth manual analyses can identify remote homologs in many apparently "orphan" viral proteins.A database for orphan genes in Poaceae.

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Mechanisms and dynamics of orphan gene emergence in insect genomes

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Mechanisms and dynamics of orphan gene emergence in insect genomes

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Mechanisms and dynamics of orphan gene emergence in insect genomes

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Mechanisms and dynamics of orphan gene emergence in insect genomes

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Mechanisms and dynamics of orphan gene emergence in insect genomes

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Mechanisms and dynamics of orphan gene emergence in insect genomes

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Mechanisms and dynamics of orphan gene emergence in insect genomes

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Mechanisms and dynamics of orphan gene emergence in insect genomes

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Mechanisms and dynamics of orphan gene emergence in insect genomes

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Mechanisms and dynamics of orphan gene emergence in insect genomes

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Genome Biology and Evolution

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Mechanisms and dynamics of orphan gene emergence in insect genomes

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Daniel F Simola

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Jürgen Gadau

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Lothar Wissler

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P2860

Initial sequencing and analysis of the human genome

GeneWise and Genomewise

The genome sequence of the leaf-cutter ant Atta cephalotes reveals insights into its obligate symbiotic lifestyle

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Overlapping genes in the human and mouse genomes

The COG database: an updated version includes eukaryotes

De novo origins of human genes

De novo origin of human protein-coding genes

Pseudogenes: Are They “Junk” or Functional DNA?

The ecoresponsive genome of Daphnia pulex

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10.1093/GBE/EVT009

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Erich Bornberg-Bauer

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