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Elucidation of hepatitis C virus transmission and early diversification by single genome sequencing

Elucidation of hepatitis C virus transmission and early diversification by single genome sequencing

http://www.wikidata.org/entity/Q28482493

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Genetic Diversity Underlying the Envelope Glycoproteins of Hepatitis C Virus: Structural and Functional Consequences and the Implications for Vaccine Design Hepatitis C virus molecular evolution: transmission, disease progression and antiviral therapy Advanced molecular surveillance of hepatitis C virus Broadly neutralizing antibodies with few somatic mutations and hepatitis C virus clearance A bioinformatics pipeline for the analyses of viral escape dynamics and host immune responses during an infection Phenotypic properties of transmitted founder HIV-1 Quantifying the diversification of hepatitis C virus (HCV) during primary infection: estimates of the in vivo mutation rate.BAsE-Seq: a method for obtaining long viral haplotypes from short sequence reads.Molecular evolution in court: analysis of a large hepatitis C virus outbreak from an evolving source.Naturally occurring dominant drug resistance mutations occur infrequently in the setting of recently acquired hepatitis C.Transmission and evolution of hepatitis C virus in HCV seroconverters in HIV infected subjects.Transmitted/founder hepatitis C viruses induce cell-type- and genotype-specific differences in innate signaling within the liver.Identification, molecular cloning, and analysis of full-length hepatitis C virus transmitted/founder genotypes 1, 3, and 4 Next-generation sequencing reveals large connected networks of intra-host HCV variants.Extensive recombination due to heteroduplexes generates large amounts of artificial gene fragments during PCR Transmitted/Founder Viruses Rapidly Escape from CD8+ T Cell Responses in Acute Hepatitis C Virus Infection Next-Generation Sequencing Reveals Frequent Opportunities for Exposure to Hepatitis C Virus in Ghana.Spouse-to-Spouse Transmission and Evolution of Hypervariable Region 1 and 5' Untranslated Region of Hepatitis C Virus Analyzed by Next-Generation Sequencing Pathogen-Associated Molecular Pattern Recognition of Hepatitis C Virus Transmitted/Founder Variants by RIG-I Is Dependent on U-Core Length.Longitudinal Antigenic Sequences and Sites from Intra-Host Evolution (LASSIE) Identifies Immune-Selected HIV Variants.Deep sequencing is an appropriate tool for the selection of unique Hepatitis C virus (HCV) variants after single genomic amplification Single-Genome Sequencing of Hepatitis C Virus in Donor-Recipient Pairs Distinguishes Modes and Models of Virus Transmission and Early Diversification.Incorporating founder virus information in vaccine field trials.Molecular identification, cloning and characterization of transmitted/founder HIV-1 subtype A, D and A/D infectious molecular clones Hepatitis C virus infection induces autocrine interferon signaling by human liver endothelial cells and release of exosomes, which inhibits viral replication Sequence and functional analysis of the envelope glycoproteins of hepatitis C virus variants selectively transmitted to a new host.A novel strategy to develop a robust infectious hepatitis C virus cell culture system directly from a clinical isolate Hepatitis C virus vaccines in the era of new direct-acting antivirals.Characterization of Hepatitis C Virus (HCV) Envelope Diversification from Acute to Chronic Infection within a Sexually Transmitted HCV Cluster by Using Single-Molecule, Real-Time Sequencing.Antiviral activity of Bacillus sp. isolated from the marine sponge Petromica citrina against bovine viral diarrhea virus, a surrogate model of the hepatitis C virus.Tracking HCV protease population diversity during transmission and susceptibility of founder populations to antiviral therapy.Hepatitis C Virus Postexposure Prophylaxis in the Healthcare Worker: Why Direct-Acting Antivirals Don't Change a Thing.Similarities between Human Immunodeficiency Virus Type 1 and Hepatitis C Virus Genetic and Phenotypic Protease Quasispecies Diversity.Nosocomial hepatitis C virus transmission from tampering with injectable anesthetic opioids.Use of short tandem repeat fingerprinting to validate sample origins in hepatitis C virus molecular epidemiology studies.Vertical transmission of hepatitis C virus: variable transmission bottleneck and evidence of mid-gestation in utero infection.HIV-1 and Hepatitis C virus selection bottleneck in Chinese people who inject drugs.Genetic bottlenecks in intraspecies virus transmission.Inferred father-to-son transmission of herpes simplex virus results in near-perfect preservation of viral genome identity and in vivo phenotypes.Transmissibility of intra-host hepatitis C virus variants.

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Elucidation of hepatitis C virus transmission and early diversification by single genome sequencing

http://www.wikidata.org/entity/Q28482493

description

2012 nî lūn-bûn

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2012 թուականին հրատարակուած գիտական յօդուած

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2012 թվականին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年论文

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Elucidation of hepatitis C vir ...... on by single genome sequencing

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Elucidation of hepatitis C vir ...... on by single genome sequencing

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Elucidation of hepatitis C vir ...... on by single genome sequencing

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Elucidation of hepatitis C vir ...... on by single genome sequencing

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Elucidation of hepatitis C vir ...... on by single genome sequencing

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Elucidation of hepatitis C vir ...... on by single genome sequencing

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Elucidation of hepatitis C vir ...... on by single genome sequencing

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Elucidation of hepatitis C vir ...... on by single genome sequencing

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Elucidation of hepatitis C vir ...... on by single genome sequencing

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Elucidation of hepatitis C vir ...... on by single genome sequencing

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Elena E Giorgi

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Erica H Parrish

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Gerald H Learn

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Hui Li

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Lily M Blair

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Mark B Stoddard

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Michael S Saag

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Paul A Goepfert

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Shuyi Wang

http://www.w3.org/2001/XMLSchema#string

P2860

Genetic variation in IL28B and spontaneous clearance of hepatitis C virus

Viral mutation rates

Assessment of hepatitis C virus sequence complexity by electrophoretic mobilities of both single-and double-stranded DNAs

Wide range of quasispecies diversity during primary hepatitis C virus infection

Quantitative Analysis of the Hepatitis C Virus Replication Complex

Identification of a Naturally Occurring Recombinant Genotype 2/6 Hepatitis C Virus

Viral Sequence Evolution in Acute Hepatitis C Virus Infection

CD8 Epitope Escape and Reversion in Acute HCV Infection

Cellular immune selection with hepatitis C virus persistence in humans

Immune evasion versus recovery after acute hepatitis C virus infection from a shared source

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8

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Peter T. Hraber

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Tanmoy Bhattacharya

Alan S. Perelson

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2012-01-01T00:00:00Z

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22927816

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transmission of virus

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