A pilot study of rapid benchtop sequencing of Staphylococcus aureus and Clostridium difficile for outbreak detection and surveillance
about
Microevolutionary analysis of Clostridium difficile genomes to investigate transmissionRapid draft sequencing and real-time nanopore sequencing in a hospital outbreak of SalmonellaWhole-genome sequencing targets drug-resistant bacterial infectionsHigh-throughput sequencing: towards a genome-based diagnosis in infectious diseasesWithin-host evolution of bacterial pathogens.Diversity and Evolution in the Genome of Clostridium difficileExpansion of Microbial ForensicsInsights from genomics into bacterial pathogen populationsGeneSippr: a rapid whole-genome approach for the identification and characterization of foodborne pathogens such as priority Shiga toxigenic Escherichia coliShort-term genome stability of serial Clostridium difficile ribotype 027 isolates in an experimental gut model and recurrent human diseaseDetection of mixed infection from bacterial whole genome sequence data allows assessment of its role in Clostridium difficile transmissionRoutine use of microbial whole genome sequencing in diagnostic and public health microbiologyA Systematic Bayesian Integration of Epidemiological and Genetic DataLife After USA300: The Rise and Fall of a Superbug.Klebsiella pneumoniae carbapenemase (KPC)-producing K. pneumoniae at a single institution: insights into endemicity from whole-genome sequencing.Transforming clinical microbiology with bacterial genome sequencing.Tackling Drug Resistant Infection Outbreaks of Global Pandemic Escherichia coli ST131 Using Evolutionary and Epidemiological Genomics.A genomic portrait of the emergence, evolution, and global spread of a methicillin-resistant Staphylococcus aureus pandemic.Rapid clinical bacteriology and its future impactResolution of a meningococcal disease outbreak from whole-genome sequence data with rapid Web-based analysis methods.snpTree--a web-server to identify and construct SNP trees from whole genome sequence data.Bayesian reconstruction of disease outbreaks by combining epidemiologic and genomic data.Whole-genome sequencing to delineate Mycobacterium tuberculosis outbreaks: a retrospective observational study.A Bacterial Analysis Platform: An Integrated System for Analysing Bacterial Whole Genome Sequencing Data for Clinical Diagnostics and SurveillancePredicting the virulence of MRSA from its genome sequence.Whole-Genome Sequencing Reveals the Contribution of Long-Term Carriers in Staphylococcus aureus Outbreak Investigation.Evaluating next-generation sequencing for direct clinical diagnostics in diarrhoeal disease.Rapid whole-genome sequencing for surveillance of Salmonella enterica serovar enteritidisHigh-throughput sequencing for the study of bacterial pathogen biologyWhole-genome sequencing to control antimicrobial resistanceA large-scale genomic approach affords unprecedented resolution for the molecular epidemiology and evolutionary history of contagious caprine pleuropneumoniaSRST2: Rapid genomic surveillance for public health and hospital microbiology labs.High-Throughput Sequencing, a VersatileWeapon to Support Genome-Based Diagnosis in Infectious Diseases: Applications to Clinical BacteriologyWGS Analysis and Interpretation in Clinical and Public Health Microbiology Laboratories: What Are the Requirements and How Do Existing Tools Compare?Automated extraction of typing information for bacterial pathogens from whole genome sequence data: Neisseria meningitidis as an exemplar.MRSA transmission on a neonatal intensive care unit: epidemiological and genome-based phylogenetic analysesA universal protocol to generate consensus level genome sequences for foot-and-mouth disease virus and other positive-sense polyadenylated RNA viruses using the Illumina MiSeqWithin-host evolution of Staphylococcus aureus during asymptomatic carriage.A modified RNA-Seq approach for whole genome sequencing of RNA viruses from faecal and blood samplesRapid bacterial whole-genome sequencing to enhance diagnostic and public health microbiology
P2860
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P2860
A pilot study of rapid benchtop sequencing of Staphylococcus aureus and Clostridium difficile for outbreak detection and surveillance
description
2012 թուականին հրատարակուած գիտական յօդուած
@hyw
2012 թվականին հրատարակված գիտական հոդված
@hy
artículu científicu espublizáu en 2012
@ast
scientific article (publication date: 2012)
@en
vedecký článok (publikovaný 2012)
@sk
vědecký článek publikovaný v roce 2012
@cs
wetenschappelijk artikel (gepubliceerd in 2012)
@nl
wissenschaftlicher Artikel
@de
наукова стаття, опублікована у 2012
@uk
مقالة علمية (نشرت عام 2012)
@ar
name
A pilot study of rapid benchto ...... eak detection and surveillance
@ast
A pilot study of rapid benchto ...... eak detection and surveillance
@en
A pilot study of rapid benchto ...... eak detection and surveillance
@en-gb
A pilot study of rapid benchto ...... eak detection and surveillance
@nl
type
label
A pilot study of rapid benchto ...... eak detection and surveillance
@ast
A pilot study of rapid benchto ...... eak detection and surveillance
@en
A pilot study of rapid benchto ...... eak detection and surveillance
@en-gb
A pilot study of rapid benchto ...... eak detection and surveillance
@nl
prefLabel
A pilot study of rapid benchto ...... eak detection and surveillance
@ast
A pilot study of rapid benchto ...... eak detection and surveillance
@en
A pilot study of rapid benchto ...... eak detection and surveillance
@en-gb
A pilot study of rapid benchto ...... eak detection and surveillance
@nl
P2093
P2860
P50
P3181
P1433
P1476
A pilot study of rapid benchto ...... eak detection and surveillance
@en
P2093
A Sarah Walker
Angela M Kearns
Angela Shaw
Camilla L C Ip
David Buck
Derrick W Crook
Lily O'Connor
N Claire Gordon
Peter J Donnelly
P2860
P304
P3181
P356
10.1136/BMJOPEN-2012-001124
P407
P577
2012-01-01T00:00:00Z