Bacterial community comparisons by taxonomy-supervised analysis independent of sequence alignment and clustering - Test2 - elhamkhani - TriplyDB

Bacterial community comparisons by taxonomy-supervised analysis independent of sequence alignment and clustering

Bacterial community comparisons by taxonomy-supervised analysis independent of sequence alignment and clustering

http://www.wikidata.org/entity/Q28740773

about

Changes in the Structure of the Microbial Community Associated with Nannochloropsis salina following Treatments with Antibiotics and Bioactive Compounds Statistical object data analysis of taxonomic trees from human microbiome data Ribosomal Database Project: data and tools for high throughput rRNA analysis.Interpreting 16S metagenomic data without clustering to achieve sub-OTU resolution.Microbial community structure of a pilot-scale thermophilic anaerobic digester treating poultry litter.Defining the core Arabidopsis thaliana root microbiome.Regime shift in sandy beach microbial communities following Deepwater Horizon oil spill remediation efforts.Impact of next generation sequencing techniques in food microbiology.Estimation of bacterial diversity using next generation sequencing of 16S rDNA: a comparison of different workflows A comparative study of the bacterial community in denitrifying and traditional enhanced biological phosphorus removal processes.Distribution-based clustering: using ecology to refine the operational taxonomic unit.Contemporary environmental variation determines microbial diversity patterns in acid mine drainage.Conversion of the Amazon rainforest to agriculture results in biotic homogenization of soil bacterial communities.Substrate-Specific Development of Thermophilic Bacterial Consortia by Using Chemically Pretreated Switchgrass.Effect of sugarcane burning or green harvest methods on the Brazilian Cerrado soil bacterial community structure Bacterial community composition of anthropogenic biochar and Amazonian anthrosols assessed by 16S rRNA gene 454 pyrosequencing.Recently deglaciated high-altitude soils of the Himalaya: diverse environments, heterogenous bacterial communities and long-range dust inputs from the upper troposphere.Crop monoculture rather than agriculture reduces the spatial turnover of soil bacterial communities at a regional scale.Diet is a major factor governing the fecal butyrate-producing community structure across Mammalia, Aves and Reptilia.Baseline survey of root-associated microbes of Taxus chinensis (Pilger) Rehd.Soil bacterial community responses to warming and grazing in a Tibetan alpine meadow.Microbial community in a pilot-scale bioreactor promoting anaerobic digestion and sulfur-driven denitrification for domestic sewage treatment.The role of the intestinal microbiota in type 1 diabetes mellitus.Composition and Interactions among Bacterial, Microeukaryotic, and T4-like Viral Assemblages in Lakes from Both Polar Zones Metagenomic Analysis of Chicken Gut Microbiota for Improving Metabolism and Health of Chickens - A Review.Analysis of the mouse gut microbiome using full-length 16S rRNA amplicon sequencing Exploring gastric bacterial community in young pigs.Does the gut microbiota have a role in type 1 diabetes? Early evidence from humans and animal models of the disease Metagenomic Analysis of Bacterial Communities of Antarctic Surface Snow.Proposed model for the high rate of rearrangement and rapid migration observed in some IncA/C plasmid lineages.Analytical tools and databases for metagenomics in the next-generation sequencing era Exploring the Influence of Environmental Factors on Bacterial Communities within the Rhizosphere of the Cu-tolerant plant, Elsholtzia splendens.The Microbiome of Eucalyptus Roots under Different Management Conditions and Its Potential for Biological Nitrogen Fixation.Experimental metagenomics and ribosomal profiling of the human skin microbiome.Metagenomic analysis of lacustrine viral diversity along a latitudinal transect of the Antarctic Peninsula.Impacts of aquaculture wastewater irrigation on soil microbial functional diversity and community structure in arid regions.Bacterial microbiomes of individual ectomycorrhizal Pinus sylvestris roots are shaped by soil horizon and differentially sensitive to nitrogen addition.The madness of microbiome: Attempting to find consensus "best practice" for 16S microbiome studies.Structural and functional variability in root-associated bacterial microbiomes of Cd/Zn hyperaccumulator Sedum alfredii.Operation performance and microbial community dynamics of phosphorus removal sludge with different electron acceptors.

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Bacterial community comparisons by taxonomy-supervised analysis independent of sequence alignment and clustering

http://www.wikidata.org/entity/Q28740773

description

2011 nî lūn-bûn

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2011 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

@hyw

2011 թվականի օգոստոսին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年论文

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name

Bacterial community comparison ...... uence alignment and clustering

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Bacterial community comparison ...... uence alignment and clustering

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Bacterial community comparison ...... uence alignment and clustering

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type

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Bacterial community comparison ...... uence alignment and clustering

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Bacterial community comparison ...... uence alignment and clustering

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Bacterial community comparison ...... uence alignment and clustering

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Bacterial community comparison ...... uence alignment and clustering

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Bacterial community comparison ...... uence alignment and clustering

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PNAS.1111435108

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Proceedings of the National Academy of Sciences of the United States of America

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Bacterial community comparison ...... uence alignment and clustering

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P2093

Ederson da C Jesus

http://www.w3.org/2001/XMLSchema#string

James R Cole

http://www.w3.org/2001/XMLSchema#string

Jordan A Fish

http://www.w3.org/2001/XMLSchema#string

Qiong Wang

http://www.w3.org/2001/XMLSchema#string

Ryan J Farris

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Woo Jun Sul

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P2860

The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

Pyrosequencing enumerates and contrasts soil microbial diversity

Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases

Infernal 1.0: inference of RNA alignments

Microbial diversity in the deep sea and the underexplored "rare biosphere"

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

UniFrac: a new phylogenetic method for comparing microbial communities.

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

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14637-42

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10.1073/PNAS.1111435108

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35

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108

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2011-08-30T00:00:00Z

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51601240

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21873204

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3167511

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