Regulatory on/off minimization of metabolic flux changes after genetic perturbations
about
A protocol for generating a high-quality genome-scale metabolic reconstructionEvolutionary programming as a platform for in silico metabolic engineeringConstraint Based Modeling Going MulticellularSoftware applications for flux balance analysisComputational approaches for understanding energy metabolismDRUM: a new framework for metabolic modeling under non-balanced growth. Application to the carbon metabolism of unicellular microalgaesybil – Efficient constraint-based modelling in RIntegration of metabolomics data into metabolic networksGenetic basis and detection of unintended effects in genetically modified crop plantsAnalysis of genetic variation and potential applications in genome-scale metabolic modelingIn Silico Constraint-Based Strain Optimization Methods: the Quest for Optimal Cell FactoriesData-driven integration of genome-scale regulatory and metabolic network modelsOptFlux: an open-source software platform for in silico metabolic engineeringModeling of non-steroidal anti-inflammatory drug effect within signaling pathways and miRNA-regulation pathwaysMetabolic constraint-based refinement of transcriptional regulatory networksk-OptForce: integrating kinetics with flux balance analysis for strain designCONSTRICTOR: constraint modification provides insight into design of biochemical networksReconstruction and analysis of genome-scale metabolic model of a photosynthetic bacteriumA framework for evolutionary systems biologyReconstruction of biochemical networks in microorganismsWhole-genome metabolic network reconstruction and constraint-based modelingSystematic evaluation of objective functions for predicting intracellular fluxes in Escherichia coliScalable steady state analysis of Boolean biological regulatory networks.A Method to Constrain Genome-Scale Models with 13C Labeling Data.A robust and efficient method for estimating enzyme complex abundance and metabolic flux from expression data.Improving flux predictions by integrating data from multiple strains.Using a logical model to predict the growth of yeast.Incorporation of enzyme concentrations into FBA and identification of optimal metabolic pathways.Genome-scale models of bacterial metabolism: reconstruction and applications.GrowMatch: an automated method for reconciling in silico/in vivo growth predictionsUtilizing elementary mode analysis, pathway thermodynamics, and a genetic algorithm for metabolic flux determination and optimal metabolic network designOptORF: Optimal metabolic and regulatory perturbations for metabolic engineering of microbial strains.Omic data from evolved E. coli are consistent with computed optimal growth from genome-scale modelsMaximal sum of metabolic exchange fluxes outperforms biomass yield as a predictor of growth rate of microorganisms.Evolutionary systems biology of amino acid biosynthetic cost in yeast.Improved network performance via antagonism: From synthetic rescues to multi-drug combinations.FASIMU: flexible software for flux-balance computation series in large metabolic networks.Synthetic and systems biology for microbial production of commodity chemicals.Analysis of complex metabolic behavior through pathway decomposition.An improved kinetic model for the acetone-butanol-ethanol pathway of Clostridium acetobutylicum and model-based perturbation analysis.
P2860
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P2860
Regulatory on/off minimization of metabolic flux changes after genetic perturbations
description
2005 nî lūn-bûn
@nan
2005 թուականի Մայիսին հրատարակուած գիտական յօդուած
@hyw
2005 թվականի մայիսին հրատարակված գիտական հոդված
@hy
2005年の論文
@ja
2005年論文
@yue
2005年論文
@zh-hant
2005年論文
@zh-hk
2005年論文
@zh-mo
2005年論文
@zh-tw
2005年论文
@wuu
name
Regulatory on/off minimization of metabolic flux changes after genetic perturbations
@ast
Regulatory on/off minimization of metabolic flux changes after genetic perturbations
@en
type
label
Regulatory on/off minimization of metabolic flux changes after genetic perturbations
@ast
Regulatory on/off minimization of metabolic flux changes after genetic perturbations
@en
prefLabel
Regulatory on/off minimization of metabolic flux changes after genetic perturbations
@ast
Regulatory on/off minimization of metabolic flux changes after genetic perturbations
@en
P2860
P3181
P356
P1476
Regulatory on/off minimization of metabolic flux changes after genetic perturbations
@en
P2093
Omer Berkman
Tomer Shlomi
P2860
P304
P3181
P356
10.1073/PNAS.0406346102
P407
P50
P577
2005-05-24T00:00:00Z