Very fast empirical prediction and rationalization of protein pKa values
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Charged residues distribution modulates selectivity of the open state of human isoforms of the voltage dependent anion-selective channelA unified model of the GABA(A) receptor comprising agonist and benzodiazepine binding sitesPosttranslational modification and regulation of glutamate-cysteine ligase by the α,β-unsaturated aldehyde 4-hydroxy-2-nonenalStructural basis of local, pH-dependent conformational changes in glycoprotein B from herpes simplex virus type 1Muscle LIM protein interacts with cofilin 2 and regulates F-actin dynamics in cardiac and skeletal muscleStructure of the fungal beta-glucan-binding immune receptor dectin-1: implications for functionPsalmotoxin-1 docking to human acid-sensing ion channel-1Accurate, conformation-dependent predictions of solvent effects on protein ionization constantsVisualizing functional motions of membrane transporters with molecular dynamics simulationsBiomolecular electrostatics and solvation: a computational perspectiveMolecular mechanisms of disease-causing missense mutationsA conserved leucine occupies the empty substrate site of LeuT in the Na(+)-free return state.Elucidation of Enzymatic Mechanism of Phenazine Biosynthetic Protein PhzF Using QM/MM and MD SimulationsSimulating the function of sodium/proton antiportersRelationships between Th1 or Th2 iNKT cell activity and structures of CD1d-antigen complexes: meta-analysis of CD1d-glycolipids dynamics simulationsMinimum free energy path of ligand-induced transition in adenylate kinaseStructural studies of an anti-inflammatory lectin from Canavalia boliviana seeds in complex with dimannosidesDiffusion, crowding & protein stability in a dynamic molecular model of the bacterial cytoplasmDealing with low pH: entry and exit of alphaviruses and flavivirusesInsights into the mechanism of progressive RNA degradation by the archaeal exosomeA buried lysine that titrates with a normal pKa: Role of conformational flexibility at the protein-water interface as a determinant of pKavaluesOxygen Pressurized X-Ray Crystallography: Probing the Dioxygen Binding Site in Cofactorless Urate Oxidase and Implications for Its Catalytic MechanismCrystal structures of F420-dependent glucose-6-phosphate dehydrogenase FGD1 involved in the activation of the anti-tuberculosis drug candidate PA-824 reveal the basis of coenzyme and substrate bindingMultiple-Site Trimethylation of Ribosomal Protein L11 by the PrmA MethyltransferaseShort strong hydrogen bonds in proteins: a case study of rhamnogalacturonan acetylesterase.The postfusion structure of baculovirus gp64 supports a unified view of viral fusion machinesCrystal Structure and Autoactivation Pathway of the Precursor Form of Human Tripeptidyl-peptidase 1, the Enzyme Deficient in Late Infantile Ceroid LipofuscinosisDihydroorotase from the Hyperthermophile Aquifiex aeolicus Is Activated by Stoichiometric Association with Aspartate Transcarbamoylase and Forms a One-Pot Reactor for Pyrimidine Biosynthesis † ‡Using affinity chromatography to engineer and characterize pH-dependent protein switchesThe pKa Values of Acidic and Basic Residues Buried at the Same Internal Location in a Protein Are Governed by Different FactorsChaperones of F1-ATPaseStructure and Mechanism of a Na+-Independent Amino Acid TransporterAn aspartate and a water molecule mediate efficient acid-base catalysis in a tailored antibody pocketAutofluorescent Proteins with Excitation in the Optical Window for Intravital Imaging in MammalsCrystal Structure of the Peptidase Domain of Streptococcus ComA, a Bifunctional ATP-binding Cassette Transporter Involved in the Quorum-sensing PathwaySelf-assembly of spider silk proteins is controlled by a pH-sensitive relayInsights into Function, Catalytic Mechanism, and Fold Evolution of Selenoprotein Methionine Sulfoxide Reductase B1 through Structural AnalysisThe catalytic aspartate is protonated in the Michaelis complex formed between trypsin and an in vitro evolved substrate-like inhibitor: a refined mechanism of serine protease actionCrystallographic Snapshots of the Complete Catalytic Cycle of the Unregulated Aspartate Transcarbamoylase from Bacillus subtilisStructure and mechanism ofEscherichia coliglutathionylspermidine amidase belonging to the family of cysteine; histidine-dependent amidohydrolases/peptidases
P2860
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P2860
Very fast empirical prediction and rationalization of protein pKa values
description
2005 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2005 թվականի դեկտեմբերին հրատարակված գիտական հոդված
@hy
artículu científicu espublizáu en 2005
@ast
im Dezember 2005 veröffentlichter wissenschaftlicher Artikel
@de
scientific article (publication date: December 2005)
@en
wetenschappelijk artikel (gepubliceerd op 2005/12/01)
@nl
наукова стаття, опублікована в грудні 2005
@uk
مقالة علمية (نشرت في ديسمبر 2005)
@ar
name
Very fast empirical prediction and rationalization of protein pKa values
@ast
Very fast empirical prediction and rationalization of protein pKa values
@en
type
label
Very fast empirical prediction and rationalization of protein pKa values
@ast
Very fast empirical prediction and rationalization of protein pKa values
@en
prefLabel
Very fast empirical prediction and rationalization of protein pKa values
@ast
Very fast empirical prediction and rationalization of protein pKa values
@en
P2093
P2860
P3181
P356
P1433
P1476
Very fast empirical prediction and rationalization of protein pKa values
@en
P2093
P2860
P304
P3181
P356
10.1002/PROT.20660
P407
P577
2005-12-01T00:00:00Z