about
Data integration workflow for search of disease driving genes and genetic variantsLarge-scale data integration framework provides a comprehensive view on glioblastoma multiformeOptimized LOWESS normalization parameter selection for DNA microarray dataTherapeutic targets for HIV-1 infection in the host proteome.Plasticity of blood- and lymphatic endothelial cells and marker identificationTransmembrane prostatic acid phosphatase (TMPAP) interacts with snapin and deficient mice develop prostate adenocarcinomaPar6G suppresses cell proliferation and is targeted by loss-of-function mutations in multiple cancers.Mutations in the circadian gene CLOCK in colorectal cancerIndividual and combined effects of DNA methylation and copy number alterations on miRNA expression in breast tumorsWorkflow for automated quantification of cerebromicrovascular gelatinase activity.Anima: modular workflow system for comprehensive image data analysis.Genomic region operation kit for flexible processing of deep sequencing data.Integrative analysis of deep sequencing data identifies estrogen receptor early response genes and links ATAD3B to poor survival in breast cancerComparative analysis of methods for identifying somatic copy number alterations from deep sequencing data.Are data from different gene expression microarray platforms comparable?Integrated mechanistic and data-driven modelling for multivariate analysis of signalling pathways.Data integration to prioritize drugs using genomics and curated data.Language-Agnostic Reproducible Data Analysis Using Literate Programming.Decision tree modeling predicts effects of inhibiting contractility signaling on cell motilityDeciphering downstream gene targets of PI3K/mTOR/p70S6K pathway in breast cancerRapid mobilization of cytotoxic lymphocytes induced by dasatinib therapy.Comparison of Affymetrix data normalization methods using 6,926 experiments across five array generations.Advanced analysis and visualization of gene copy number and expression dataMultiple components of PKA and TGF-β pathways are mutated in pseudomyxoma peritoneiIntegrated data management and validation platform for phosphorylated tandem mass spectrometry data.CNAmet: an R package for integrating copy number, methylation and expression data.Comprehensive exon array data processing method for quantitative analysis of alternative spliced variants.Analysis of BMP4 and BMP7 signaling in breast cancer cells unveils time-dependent transcription patterns and highlights a common synexpression group of genesIntegrative platform to translate gene sets to networks.Comparative analysis of algorithms for integration of copy number and expression data.Germline variation in TP53 regulatory network genes associates with breast cancer survival and treatment outcome.The phytoestrogen genistein is a tissue-specific androgen receptor modulator.Dual role of FoxA1 in androgen receptor binding to chromatin, androgen signalling and prostate cancerNAV3 copy number changes and target genes in basal and squamous cell cancers.Functional profiling of precursor MicroRNAs identifies MicroRNAs essential for glioma proliferation.High-resolution analysis of gene copy number alterations in human prostate cancer using CGH on cDNA microarrays: impact of copy number on gene expression.Identification of genetic markers with synergistic survival effect in cancerMolecular characterization of subcutaneous panniculitis-like T-cell lymphoma reveals upregulation of immunosuppression- and autoimmunity-associated genes.Adipocyte morphology and implications for metabolic derangements in acquired obesity.Deregulation of COMMD1 is associated with poor prognosis in diffuse large B-cell lymphoma.
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description
Finnish cancer researcher (D.Tech.), professor of systems biology (Univ. of Helsinki)
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Fins onderzoeker
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hulumtues
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suomalainen syöpätutkija (TkT), helsingin yliopiston systeemibiologian professori
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հետազոտող
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name
Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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prefLabel
Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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Sampsa Hautaniemi
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P106
P21
P2456
P27
P31
P496
0000-0002-7749-2694
P569
2000-01-01T00:00:00Z