Critical assessment of methods of protein structure prediction: Progress and new directions in round XI.
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Accurate De Novo Prediction of Protein Contact Map by Ultra-Deep Learning ModelAssessment of template-based modeling of protein structure in CASP11.Recent advances in sequence-based protein structure prediction.Time, space, and disorder in the expanding proteome universe.Determining protein similarity by comparing hydrophobic core structure.VoroMQA: Assessment of protein structure quality using interatomic contact areas.The evolution of logic circuits for the purpose of protein contact map predictionRNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozymeMolecular modeling and molecular dynamic simulation of the effects of variants in the TGFBR2 kinase domain as a paradigm for interpretation of variants obtained by next generation sequencing.Superposition-free comparison and clustering of antibody binding sites: implications for the prediction of the nature of their antigenUnderstanding the structural basis of substrate recognition by Plasmodium falciparum plasmepsin V to aid in the design of potent inhibitors.Benchmarking predictions of allostery in liver pyruvate kinase in CAGI4.An overview of comparative modelling and resources dedicated to large-scale modelling of genome sequences.Role of Structural Bioinformatics in Drug Discovery by Computational SNP Analysis: Analyzing Variation at the Protein Level.I-TASSER-MR: automated molecular replacement for distant-homology proteins using iterative fragment assembly and progressive sequence truncation.Co-evolution techniques are reshaping the way we do structural bioinformatics.Identification of metal ion binding sites based on amino acid sequences.Observation selection bias in contact prediction and its implications for structural bioinformaticsDefinition and classification of evaluation units for tertiary structure prediction in CASP12 facilitated through semi-automated metrics.Assessment of hard target modeling in CASP12 reveals an emerging role of alignment-based contact prediction methods.Critical assessment of methods of protein structure prediction (CASP)-Round XII.Evaluation of the template-based modeling in CASP12.Computationally-driven identification of antibody epitopes.Base pair probability estimates improve the prediction accuracy of RNA non-canonical base pairs.Enhancing Evolutionary Couplings with Deep Convolutional Neural Networks.Assessment of data-assisted prediction by inclusion of crosslinking/mass-spectrometry and small angle X-ray scattering data in the 12th Critical Assessment of protein Structure Prediction experiment.Predictive and Experimental Approaches for Elucidating Protein-Protein Interactions and Quaternary Structures.Continuous Automated Model EvaluatiOn (CAMEO) complementing the critical assessment of structure prediction in CASP12.The BioFragment Database (BFDb): An open-data platform for computational chemistry analysis of noncovalent interactions.FlexPepDock lessons from CAPRI peptide-protein rounds and suggested new criteria for assessment of model quality and utility.Finding the needle in the haystack: towards solving the protein-folding problem computationally.CryoEM-based hybrid modeling approaches for structure determination.Rules for connectivity of secondary structure elements in protein: Two-layer αβ sandwiches.Modeling of protein complexes in CAPRI Round 37 using template-based approach combined with model selection.Protein structure model refinement in CASP12 using short and long molecular dynamics simulations in implicit solvent.Relative binding affinity prediction of farnesoid X receptor in the D3R Grand Challenge 2 using FEP.Solution structure of sperm lysin yields novel insights into molecular dynamics of rapid protein evolution.Theoretical restrictions on longest implicit time scales in Markov state models of biomolecular dynamics.Protein homology model refinement by large-scale energy optimization.Sequence-based prediction of physicochemical interactions at protein functional sites using a function-and-interaction-annotated domain profile database.
P2860
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P2860
Critical assessment of methods of protein structure prediction: Progress and new directions in round XI.
description
2016 nî lūn-bûn
@nan
2016 թուականի Մայիսին հրատարակուած գիտական յօդուած
@hyw
2016 թվականի մայիսին հրատարակված գիտական հոդված
@hy
2016年の論文
@ja
2016年論文
@yue
2016年論文
@zh-hant
2016年論文
@zh-hk
2016年論文
@zh-mo
2016年論文
@zh-tw
2016年论文
@wuu
name
Critical assessment of methods ...... nd new directions in round XI.
@ast
Critical assessment of methods ...... nd new directions in round XI.
@en
type
label
Critical assessment of methods ...... nd new directions in round XI.
@ast
Critical assessment of methods ...... nd new directions in round XI.
@en
prefLabel
Critical assessment of methods ...... nd new directions in round XI.
@ast
Critical assessment of methods ...... nd new directions in round XI.
@en
P2860
P356
P1433
P1476
Critical assessment of methods ...... nd new directions in round XI.
@en
P2093
John Moult
P2860
P356
10.1002/PROT.25064
P407
P478
84 Suppl 1
P577
2016-05-12T00:00:00Z