Defining and searching for structural motifs using DeepView/Swiss-PdbViewer. - Test2 - elhamkhani - TriplyDB

Defining and searching for structural motifs using DeepView/Swiss-PdbViewer.

Defining and searching for structural motifs using DeepView/Swiss-PdbViewer.

http://www.wikidata.org/entity/Q30419546

about

Importance of Hydrophobic Cavities in Allosteric Regulation of Formylglycinamide Synthetase: Insight from Xenon Trapping and Statistical Coupling Analysis Molecular cloning, bioinformatics analysis and expression of insulin-like growth factor 2 from Tianzhu white yak, Bos grunniens Artificial Diiron Enzymes with a De Novo Designed Four-Helix Bundle Structure Predicting a double mutant in the twilight zone of low homology modeling for the skeletal muscle voltage-gated sodium channel subunit beta-1 (Nav1.4 β1).Understanding the microscopic binding mechanism of hydroxylated and sulfated polybrominated diphenyl ethers with transthyretin by molecular docking, molecular dynamics simulations and binding free energy calculations.Recurrent structural motifs in non-homologous protein structures.Amyloid β-Protein C-Terminal Fragments: Formation of Cylindrins and β-Barrels.Estimation of protein function using template-based alignment of enzyme active sites.Novel mutations support a role for Profilin 1 in the pathogenesis of ALS.Chemotherapy Drug Response to the L858R-induced Conformational Change of EGFR Activation Loop in Lung Cancer.Generation of an integrated Hieracium genomic and transcriptomic resource enables exploration of small RNA pathways during apomixis initiation Genome-wide association study identifies multiple susceptibility loci for craniofacial microsomia.Synthesis, anti-inflammatory, bactericidal activities and docking studies of novel 1,2,3-triazoles derived from ibuprofen using click chemistry.Impacts of Nonsynonymous Single Nucleotide Polymorphisms of Adiponectin Receptor 1 Gene on Corresponding Protein Stability: A Computational Approach.Conserved Endonuclease Function of Hantavirus L Polymerase.Barley Yellow Mosaic Virus VPg Is the Determinant Protein for Breaking eIF4E-Mediated Recessive Resistance in Barley Plants First comprehensive in silico analysis of the functional and structural consequences of SNPs in human GalNAc-T1 gene VHR/DUSP3 phosphatase: structure, function and regulation.From ZikV genome to vaccine: in silico approach for the epitope-based peptide vaccine against Zika virus envelope glycoprotein.Analysis of Coxiela burnetti dihydrofolate reductase via in silico docking with inhibitors and molecular dynamics simulation.A multifaceted computational report on the variants effect on KIR2DL3 and IFNL3 candidate gene in HCV clearance.Functional interpretation and structural insights of Arabidopsis lyrata cytochrome P450 CYP71A13 involved in auxin synthesis Structure prediction of GPCRs using piecewise homologs and application to the human CCR5 chemokine receptor: validation through agonist and antagonist docking.Reversing thyroid-hormone-mediated repression of a HSV-1 promoter via computationally guided mutagenesis.Molecular docking studies of fused coumarin derivatives as inhibitors of GlcN-6.PilVax - a novel peptide delivery platform for the development of mucosal vaccines.Alanine mutation of the catalytic sites of Pantothenate Synthetase causes distinct conformational changes in the ATP binding region.LOV2-Controlled Photoactivation of Protein Trans-Splicing.An evolutionarily conserved allosteric site modulates beta-lactamase activity.Microbial diversification of Diels-Alder cycloadducts by whole cells of Penicillium brasilianum.Characterization and alternative splicing profiles of lipoxygenase gene family in tea plant (Camellia sinensis).A novel B- and helper T-cell epitopes-based prophylactic vaccine against Echinococcus granulosus.Direct neurotransmitter activation of voltage-gated potassium channels.From in silico to in vitro: a trip to reveal flavonoid binding on the Rattus norvegicus Kir6.1 ATP-sensitive inward rectifier potassium channel.Buffalo nasal odorant-binding protein (bunOBP) and its structural evaluation with putative pheromones.Dynamics and Thermodynamics of Transthyretin Association from Molecular Dynamics Simulations.Ancient and modern anticonvulsants act synergistically in a KCNQ potassium channel binding pocket Elucidating the Inhibitory Potential of Designed Peptides Against Amyloid Fibrillation and Amyloid Associated Cytotoxicity

P2860

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P2860

Defining and searching for structural motifs using DeepView/Swiss-PdbViewer.

http://www.wikidata.org/entity/Q30419546

description

2012 nî lūn-bûn

@nan

2012 թուականի Յուլիսին հրատարակուած գիտական յօդուած

@hyw

2012 թվականի հուլիսին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

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2012年論文

@zh-hk

2012年論文

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2012年論文

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2012年论文

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name

Defining and searching for structural motifs using DeepView/Swiss-PdbViewer.

@ast

Defining and searching for structural motifs using DeepView/Swiss-PdbViewer.

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type

label

Defining and searching for structural motifs using DeepView/Swiss-PdbViewer.

@ast

Defining and searching for structural motifs using DeepView/Swiss-PdbViewer.

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prefLabel

Defining and searching for structural motifs using DeepView/Swiss-PdbViewer.

@ast

Defining and searching for structural motifs using DeepView/Swiss-PdbViewer.

@en

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1471-2105-13-173

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BMC Bioinformatics

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Defining and searching for structural motifs using DeepView/Swiss-PdbViewer.

@en

P2093

Maria U Johansson

http://www.w3.org/2001/XMLSchema#string

Nicolas Guex

http://www.w3.org/2001/XMLSchema#string

Olivier Michielin

http://www.w3.org/2001/XMLSchema#string

Vincent Zoete

http://www.w3.org/2001/XMLSchema#string

P2860

The Protein Data Bank

The FoldX web server: an online force field

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

PISCES: recent improvements to a PDB sequence culling server

Crystal structure of apo-calmodulin bound to the first two IQ motifs of myosin V reveals essential recognition features

Protein secondary structure prediction based on position-specific scoring matrices

Touring protein fold space with Dali/FSSP

SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

SCOP: a structural classification of proteins database for the investigation of sequences and structures

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1471-2105-13-173

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173

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scholarly article

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10.1186/1471-2105-13-173

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13

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2012-07-23T00:00:00Z

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229555712

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22823337

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3436773

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