Genomic and metabolic diversity of Marine Group I Thaumarchaeota in the mesopelagic of two subtropical gyresInsights into the phylogeny and coding potential of microbial dark matterXenDB: full length cDNA prediction and cross species mapping in Xenopus laevis.Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plantsUnraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolatesBioboxes: standardised containers for interchangeable bioinformatics softwareTargeted diversity generation by intraterrestrial archaea and archaeal virusesSingle-cell genomics reveals complex carbohydrate degradation patterns in poribacterial symbionts of marine spongesMetagenomic discovery of biomass-degrading genes and genomes from cow rumenRNA-related tools on the Bielefeld Bioinformatics ServerEMMA: a platform for consistent storage and efficient analysis of microarray data.acdc - Automated Contamination Detection and Confidence estimation for single-cell genome data.IsoSVM--distinguishing isoforms and paralogs on the protein level.GeneFisher-P: variations of GeneFisher as processes in Bio-jETI.Single-cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 clade.Temporal dynamics of fibrolytic and methanogenic rumen microorganisms during in situ incubation of switchgrass determined by 16S rRNA gene profilingHigh-throughput in vitro glycoside hydrolase (HIGH) screening for enzyme discovery.Potential for chemolithoautotrophy among ubiquitous bacteria lineages in the dark ocean.Decontamination of MDA reagents for single cell whole genome amplificationMeeting report: the terabase metagenomics workshop and the vision of an Earth microbiome project.UGA is an additional glycine codon in uncultured SR1 bacteria from the human microbiota.The candidate phylum Poribacteria by single-cell genomics: new insights into phylogeny, cell-compartmentation, eukaryote-like repeat proteins, and other genomic featuresGenomic insights into the uncultivated marine Zetaproteobacteria at Loihi SeamountPersonalized cloud-based bioinformatics services for research and education: use cases and the elasticHPC package.Multiple single-cell genomes provide insight into functions of uncultured Deltaproteobacteria in the human oral cavity.Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineageMycoplasma salivarium as a dominant coloniser of Fanconi anaemia associated oral carcinomaGenome sequence of the 1,4-dioxane-degrading Pseudonocardia dioxanivorans strain CB1190.Back to the Future of Soil Metagenomics.An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant.Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplanktonIntraspecies Transfer of the Chromosomal Acinetobacter baumannii blaNDM-1 Carbapenemase Gene.Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean.Two interactive Bioinformatics courses at the Bielefeld University Bioinformatics Server.Proteotyping of biogas plant microbiomes separates biogas plants according to process temperature and reactor type.Bioinformatics for NGS-based metagenomics and the application to biogas research.Fractionation of biogas plant sludge material improves metaproteomic characterization to investigate metabolic activity of microbial communities.miRNA profiling of high, low and non-producing CHO cells during biphasic fed-batch cultivation reveals process relevant targets for host cell engineering.Rapid protein alignment in the cloud: HAMOND combines fast DIAMOND alignments with Hadoop parallelism.MeCorS: Metagenome-enabled error correction of single cell sequencing reads.
P50
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P50
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Alexander Sczyrba
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Alexander Sczyrba
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Alexander Sczyrba
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