Complete viral RNA genome sequencing of ultra-low copy samples by sequence-independent amplification - Test2 - elhamkhani - TriplyDB

Complete viral RNA genome sequencing of ultra-low copy samples by sequence-independent amplification

Complete viral RNA genome sequencing of ultra-low copy samples by sequence-independent amplification

http://www.wikidata.org/entity/Q30421085

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Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak Lost in Translation (LiT): IUPHAR Review 6 Deep sequencing of protease inhibitor resistant HIV patient isolates reveals patterns of correlated mutations in Gag and protease Comparison of library preparation methods reveals their impact on interpretation of metatranscriptomic data.Identification of Known and Novel Recurrent Viral Sequences in Data from Multiple Patients and Multiple Cancers.A Next-Generation Sequencing Data Analysis Pipeline for Detecting Unknown Pathogens from Mixed Clinical Samples and Revealing Their Genetic Diversity.MOSAIK: a hash-based algorithm for accurate next-generation sequencing short-read mapping.Detection of Histone H3 mutations in cerebrospinal fluid-derived tumor DNA from children with diffuse midline glioma.Within-host whole-genome deep sequencing and diversity analysis of human respiratory syncytial virus infection reveals dynamics of genomic diversity in the absence and presence of immune pressure drVM: a new tool for efficient genome assembly of known eukaryotic viruses from metagenomes.Efficient and unbiased metagenomic recovery of RNA virus genomes from human plasma samples.De novo assembly of highly diverse viral populations.Enhanced methods for unbiased deep sequencing of Lassa and Ebola RNA viruses from clinical and biological samples.A modified RNA-Seq approach for whole genome sequencing of RNA viruses from faecal and blood samples Analysis of the genome of a Korean isolate of the Pieris rapae granulovirus enabled by its separation from total host genomic DNA by pulse-field electrophoresis.Full genome virus detection in fecal samples using sensitive nucleic acid preparation, deep sequencing, and a novel iterative sequence classification algorithm.Discovery of novel rhabdoviruses in the blood of healthy individuals from West Africa.Target-dependent enrichment of virions determines the reduction of high-throughput sequencing in virus discovery.Utility of Metagenomic Next-Generation Sequencing for Characterization of HIV and Human Pegivirus Diversity.A Pan-HIV Strategy for Complete Genome Sequencing.A method for near full-length amplification and sequencing for six hepatitis C virus genotypes Unbiased Deep Sequencing of RNA Viruses from Clinical Samples.Challenges of the Unknown: Clinical Application of Microbial Metagenomics Sphingolipids, Transcription Factors, and Conserved Toolkit Genes: Developmental Plasticity in the Ant Cardiocondyla obscurior Genotype-specific variation in West Nile virus dispersal in California Quasispecies Analyses of the HIV-1 Near-full-length Genome With Illumina MiSeq.Fluid Spatial Dynamics of West Nile Virus in the United States: Rapid Spread in a Permissive Host Environment.Direct next-generation sequencing of virus-human mixed samples without pretreatment is favorable to recover virus genome.Quantifying Next Generation Sequencing Sample Pre-Processing Bias in HIV-1 Complete Genome Sequencing.Features of Circulating Parainfluenza Virus Required for Growth in Human Airway.Whole genome sequencing and de novo assembly identifies Sydney-like variant noroviruses and recombinants during the winter 2012/2013 outbreak in England Deep sequencing of evolving pathogen populations: applications, errors, and bioinformatic solutions.Latest developments and challenges in the diagnosis of human West Nile virus infection.HIV-1 full-genome phylogenetics of generalized epidemics in sub-Saharan Africa: impact of missing nucleotide characters in next-generation sequences.Computational pan-genomics: status, promises and challenges.Genomic Analysis of Viral Outbreaks.Quasispecies evolution of the prototypical genotype 1 porcine reproductive and respiratory syndrome virus early during in vivo infection is rapid and tissue specific.Local evolutionary patterns of human respiratory syncytial virus derived from whole-genome sequencing Deep sequencing of RSV from an adult challenge study and from naturally infected infants reveals heterogeneous diversification dynamics.Development of forensic assay signatures for ebolaviruses.

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P2860

Complete viral RNA genome sequencing of ultra-low copy samples by sequence-independent amplification

http://www.wikidata.org/entity/Q30421085

description

2012 nî lūn-bûn

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2012 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած

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2012 թվականի սեպտեմբերին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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Complete viral RNA genome sequ ...... ence-independent amplification

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Complete viral RNA genome sequ ...... ence-independent amplification

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Complete viral RNA genome sequ ...... ence-independent amplification

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Aaron M Berlin

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Christian L Boutwell

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P2860

Architecture and secondary structure of an entire HIV-1 RNA genome

Integrative analysis of environmental sequences using MEGAN4

Characterizing the impact of smoking and lung cancer on the airway transcriptome using RNA-Seq

MUSCLE: multiple sequence alignment with high accuracy and high throughput

De novo assembly of human genomes with massively parallel short read sequencing

Infectious cDNA clone of the epidemic west nile virus from New York City

Virus Detection Protocols for West Nile Virus in Vertebrate and Mosquito Specimens

Emerging Pathogens: Challenges and Successes of Molecular Diagnostics

Fundamental issues in mosquito surveillance for arboviral transmission

Rhinovirus genome evolution during experimental human infection.

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10.1093/NAR/GKS794

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1

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Michael C. Zody

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