Reconciliation of genome-scale metabolic reconstructions for comparative systems analysis
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Bioinformatic approaches for functional annotation and pathway inference in metagenomics dataA metabolic network approach for the identification and prioritization of antimicrobial drug targetsComparison of 432 Pseudomonas strains through integration of genomic, functional, metabolic and expression dataUsing Genome-scale Models to Predict Biological CapabilitiesIdentification of functional differences in metabolic networks using comparative genomics and constraint-based modelsMultiMetEval: comparative and multi-objective analysis of genome-scale metabolic modelsPath2Models: large-scale generation of computational models from biochemical pathway mapsComputational approaches for microalgal biofuel optimization: a reviewReconstruction of the metabolic network of Pseudomonas aeruginosa to interrogate virulence factor synthesis.Managing uncertainty in metabolic network structure and improving predictions using EnsembleFBAReconciled rat and human metabolic networks for comparative toxicogenomics and biomarker predictions.Genotypic and phenotypic analyses of a Pseudomonas aeruginosa chronic bronchiectasis isolate reveal differences from cystic fibrosis and laboratory strains.Metabolic network modeling of microbial communities.Whole-genome sequencing in outbreak analysisComparative metabolic systems analysis of pathogenic BurkholderiaMapping global effects of the anti-sigma factor MucA in Pseudomonas fluorescens SBW25 through genome-scale metabolic modelingRobustness and plasticity of metabolic pathway flux among uropathogenic isolates of Pseudomonas aeruginosa.A novel nutritional predictor links microbial fastidiousness with lowered ubiquity, growth rate, and cooperativeness.Large-scale bi-level strain design approaches and mixed-integer programming solution techniques.Large-Scale 13C flux profiling reveals conservation of the Entner-Doudoroff pathway as a glycolytic strategy among marine bacteria that use glucose.Reconciling in vivo and in silico key biological parameters of Pseudomonas putida KT2440 during growth on glucose under carbon-limited conditionRhea--a manually curated resource of biochemical reactionsSystems biology of fungal infection.Characterising Complex Enzyme Reaction Data.Efficient Reconstruction of Predictive Consensus Metabolic Network Models.A Resource Allocation Trade-Off between Virulence and Proliferation Drives Metabolic Versatility in the Plant Pathogen Ralstonia solanacearumPathway-Consensus Approach to Metabolic Network Reconstruction for Pseudomonas putida KT2440 by Systematic Comparison of Published ModelsFrom DNA to FBA: How to Build Your Own Genome-Scale Metabolic ModelFunctional genomics of Plasmodium falciparum using metabolic modelling and analysisReconciliation of metabolites and biochemical reactions for metabolic networks.Understanding the antimicrobial mechanism of TiO₂-based nanocomposite films in a pathogenic bacterium.Systems-biology approaches for predicting genomic evolution.Metabolic network modeling and simulation for drug targeting and discovery.Programmable bacterial catalysis - designing cells for biosynthesis of value-added compounds.Genome-scale metabolic model in guiding metabolic engineering of microbial improvement.Experimental validation of in silico estimated biomass yields of Pseudomonas putida KT2440.The revisited genome of Pseudomonas putida KT2440 enlightens its value as a robust metabolic chassis.Quantifying NAD(P)H production in the upper Entner-Doudoroff pathway from Pseudomonas putida KT2440.Genome-scale reconstruction of the metabolic network in Pseudomonas stutzeri A1501.FOCAL: an experimental design tool for systematizing metabolic discoveries and model development
P2860
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P2860
Reconciliation of genome-scale metabolic reconstructions for comparative systems analysis
description
2011 nî lūn-bûn
@nan
2011 թուականի Մարտին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի մարտին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
Reconciliation of genome-scale metabolic reconstructions for comparative systems analysis
@ast
Reconciliation of genome-scale metabolic reconstructions for comparative systems analysis
@en
type
label
Reconciliation of genome-scale metabolic reconstructions for comparative systems analysis
@ast
Reconciliation of genome-scale metabolic reconstructions for comparative systems analysis
@en
prefLabel
Reconciliation of genome-scale metabolic reconstructions for comparative systems analysis
@ast
Reconciliation of genome-scale metabolic reconstructions for comparative systems analysis
@en
P2860
P1476
Reconciliation of genome-scale metabolic reconstructions for comparative systems analysis
@en
P2093
Jacek Puchałka
Vítor A P Martins dos Santos
P2860
P304
P356
10.1371/JOURNAL.PCBI.1001116
P577
2011-03-31T00:00:00Z