Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes
about
Structure, function and diversity of the healthy human microbiomeUse of Metatranscriptomics in Microbiome ResearchHow to Predict Molecular Interactions between Species?Using "Omics" and Integrated Multi-Omics Approaches to Guide Probiotic Selection to Mitigate Chytridiomycosis and Other Emerging Infectious DiseasesHigh-throughput metagenomic technologies for complex microbial community analysis: open and closed formatsA Graph-Centric Approach for Metagenome-Guided Peptide and Protein Identification in MetaproteomicsAvoidance of stochastic RNA interactions can be harnessed to control protein expression levels in bacteria and archaeaDiscovery and validation of novel and distinct RNA regulators for ribosomal protein S15 in diverse bacterial phylaTSSAR: TSS annotation regime for dRNA-seq data.Utilizing de Bruijn graph of metagenome assembly for metatranscriptome analysisThe bovine milk microbiota: insights and perspectives from -omics studies.A next generation sequencing-based method to study the intra-host genetic diversity of norovirus in patients with acute and chronic infection.Studying the microbiology of the indoor environment.Comparison of library preparation methods reveals their impact on interpretation of metatranscriptomic data.Characterization of CRISPR RNA transcription by exploiting stranded metatranscriptomic data.Community-wide transcriptome of the oral microbiome in subjects with and without periodontitisSelective and flexible depletion of problematic sequences from RNA-seq libraries at the cDNA stage.Relating the metatranscriptome and metagenome of the human gut.Hierarchical expression of genes controlled by the Bacillus subtilis global regulatory protein CodY.A dual-species co-cultivation system to study the interactions between Roseobacters and dinoflagellates.The promise of single-cell sequencing.Intracellular concentrations of 65 species of transcription factors with known regulatory functions in Escherichia coli.Gene finding in metatranscriptomic sequences.Comparative analysis of RNA sequencing methods for degraded or low-input samples.How deep is deep enough for RNA-Seq profiling of bacterial transcriptomes?Chapter 12: Human microbiome analysisConsequences of normalizing transcriptomic and genomic libraries of plant genomes using a duplex-specific nuclease and tetramethylammonium chloride.A comprehensive metatranscriptome analysis pipeline and its validation using human small intestine microbiota datasets.Simultaneous transcriptional profiling of bacteria and their host cellsRNA-seq analysis identifies new genes regulated by the histone-like nucleoid structuring protein (H-NS) affecting Vibrio cholerae virulence, stress response and chemotaxis.Comprehensive insights into transcriptional adaptation of intracellular mycobacteria by microbe-enriched dual RNA sequencingInterplay of host microbiota, genetic perturbations, and inflammation promotes local development of intestinal neoplasms in miceThe whole set of constitutive promoters recognized by RNA polymerase RpoD holoenzyme of Escherichia coli.Metatranscriptomic analysis of arctic peat soil microbiota.Improving the genetic representation of rare taxa within complex microbial communities using DNA normalization methods.Functional optimization of gene clusters by combinatorial design and assembly.Simultaneous generation of many RNA-seq libraries in a single reactionEvaluation of metatranscriptomic protocols and application to the study of freshwater microbial communities.Functional dynamics of the gut microbiome in elderly people during probiotic consumption.Sequencing and beyond: integrating molecular 'omics' for microbial community profiling.
P2860
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P2860
Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes
description
2012 nî lūn-bûn
@nan
2012 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
2012 թվականի հունվարին հրատարակված գիտական հոդված
@hy
2012年の論文
@ja
2012年論文
@yue
2012年論文
@zh-hant
2012年論文
@zh-hk
2012年論文
@zh-mo
2012年論文
@zh-tw
2012年论文
@wuu
name
Efficient and robust RNA-seq p ...... mplex community transcriptomes
@ast
Efficient and robust RNA-seq p ...... mplex community transcriptomes
@en
type
label
Efficient and robust RNA-seq p ...... mplex community transcriptomes
@ast
Efficient and robust RNA-seq p ...... mplex community transcriptomes
@en
prefLabel
Efficient and robust RNA-seq p ...... mplex community transcriptomes
@ast
Efficient and robust RNA-seq p ...... mplex community transcriptomes
@en
P2093
P2860
P50
P356
P1433
P1476
Efficient and robust RNA-seq p ...... mplex community transcriptomes
@en
P2093
Brian J Haas
Bruce W Birren
Dawn M Ciulla
Doyle V Ward
Jacques Izard
Jonathan Livny
Joshua Z Levin
Katherine Huang
P2860
P2888
P356
10.1186/GB-2012-13-3-R23
P577
2012-01-01T00:00:00Z
P5875
P6179
1036305770