Hybrid capture and next-generation sequencing identify viral integration sites from formalin-fixed, paraffin-embedded tissue. - Test2 - elhamkhani - TriplyDB

Hybrid capture and next-generation sequencing identify viral integration sites from formalin-fixed, paraffin-embedded tissue.

Hybrid capture and next-generation sequencing identify viral integration sites from formalin-fixed, paraffin-embedded tissue.

http://www.wikidata.org/entity/Q30468102

about

Comprehensive genomic studies: emerging regulatory, strategic, and quality assurance challenges for biorepositories Comprehensive profiling of retroviral integration sites using target enrichment methods from historical koala samples without an assembled reference genome Hybridization capture reveals evolution and conservation across the entire Koala retrovirus genome Metagenomic analysis of double-stranded DNA viruses in healthy adults VirusFinder: software for efficient and accurate detection of viruses and their integration sites in host genomes through next generation sequencing data.Targeted next-generation sequencing at copy-number breakpoints for personalized analysis of rearranged ends in solid tumors.Emerging view of the human virome.Progress and potential: training in genomic pathology Next-generation sequencing for cancer diagnostics: a practical perspective.A cornucopia of human polyomaviruses.Next-Generation Sequencing in Oncology: Genetic Diagnosis, Risk Prediction and Cancer Classification.Comparison of clinical targeted next-generation sequence data from formalin-fixed and fresh-frozen tissue specimens.Establishment and characterization of novel human primary and metastatic anaplastic thyroid cancer cell lines and their genomic evolution over a year as a primagraft.VERSE: a novel approach to detect virus integration in host genomes through reference genome customization Hybridization capture using short PCR products enriches small genomes by capturing flanking sequences (CapFlank)Sequencing the AML genome, transcriptome, and epigenome.A novel method for the multiplexed target enrichment of MinION next generation sequencing libraries using PCR-generated baits Investigation of Human Cancers for Retrovirus by Low-Stringency Target Enrichment and High-Throughput Sequencing Clinical Validation of Targeted Next Generation Sequencing for Colon and Lung Cancers.HIV Integration Site Analysis of Cellular Models of HIV Latency with a Probe-Enriched Next-Generation Sequencing Assay.Gut microbiota, metabolites and host immunity.Enhanced virome sequencing using targeted sequence capture.Genetic Testing and Tissue Banking for Personalized Oncology: Analytical and Institutional Factors.Improved detection suggests all Merkel cell carcinomas harbor Merkel polyomavirus Sequence capture by hybridization to explore modern and ancient genomic diversity in model and nonmodel organisms.Intricacies of assessing the human microbiome in epidemiologic studies.Targeted next generation sequencing of clinically significant gene mutations and translocations in leukemia.Merkel cell polyomavirus large T antigen has growth-promoting and inhibitory activities Retinoblastoma gene mutations detected by whole exome sequencing of Merkel cell carcinoma.dCATCH-Seq: improved sequencing of large continuous genomic targets with double-hybridization.Transmission, Evolution, and Endogenization: Lessons Learned from Recent Retroviral Invasions.NGS library preparation may generate artifactual integration sites of AAV vectors.[Molecular pathology of the lungs. New perspectives by next generation sequencing].C-terminal deletions of Merkel cell polyomavirus large T-antigen, a highly specific surrogate marker for virally induced malignancy.Simultaneous identification of clinically relevant single nucleotide variants, copy number alterations and gene fusions in solid tumors by targeted next-generation sequencing.

P2860

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P2860

Hybrid capture and next-generation sequencing identify viral integration sites from formalin-fixed, paraffin-embedded tissue.

http://www.wikidata.org/entity/Q30468102

description

2011 nî lūn-bûn

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2011 թուականի Մայիսին հրատարակուած գիտական յօդուած

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2011 թվականի մայիսին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

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2011年论文

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Hybrid capture and next-genera ...... xed, paraffin-embedded tissue.

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Hybrid capture and next-genera ...... xed, paraffin-embedded tissue.

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Hybrid capture and next-genera ...... xed, paraffin-embedded tissue.

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J.JMOLDX.2011.01.006

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The Journal of Molecular Diagnostics

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Hybrid capture and next-genera ...... ixed, paraffin-embedded tissue

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P2093

Eric J Duncavage

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Haley J Abel

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John D Pfeifer

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Jon R Armstrong

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Ryan T Demeter

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Vincent Magrini

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P2860

Genetic diagnosis by whole exome capture and massively parallel DNA sequencing

Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery

Recurring mutations found by sequencing an acute myeloid leukemia genome

Mapping short DNA sequencing reads and calling variants using mapping quality scores

T antigen mutations are a human tumor-specific signature for Merkel cell polyomavirus

Transcriptome sequencing to detect gene fusions in cancer

Clonal integration of a polyomavirus in human Merkel cell carcinoma

Next-generation DNA sequencing methods

Genome remodelling in a basal-like breast cancer metastasis and xenograft

Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads

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21497292

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3077736

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